Demequina sediminis: GCM25873_07140
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Entry
GCM25873_07140 CDS
T09136
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dss
Demequina sediminis
Pathway
dss00750
Vitamin B6 metabolism
dss01100
Metabolic pathways
dss01240
Biosynthesis of cofactors
Module
dss_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
GCM25873_07140 (pdxS)
Enzymes [BR:
dss01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
GCM25873_07140 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
NanE
NMO
IGPS
TetR_C_27
Glu_synthase
DHO_dh
FMN_dh
TMP-TENI
5-nucleotidase
Motif
Other DBs
NCBI-ProteinID:
BDZ60923
LinkDB
All DBs
Position
663756..664664
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AA seq
302 aa
AA seq
DB search
MTTTDDTTQPQVGTDLVKRGMAEMLKGGVIMDVVTPEQARIAEDAGAVAVMALERVPADI
RAQGGVARMSDPDLIQGIIDTVSIPVMAKARIGHFVEAQVLQSLGVDYIDESEVLTPADY
THHIDKWNFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRQIRAEIK
ALTALPKDELYVAAKELQAPLPLVQEIAETGKLPVVLFTAGGIATPADAAMMMQLGAEGV
FVGSGIFKSGNPAQRAAAIVKATTFFDDPSVIADVSRGLGEAMVGINVDEVPEPHRLAER
GW
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccgacgacaccactcagccccaggttggcaccgacctcgtgaagcgcggc
atggccgagatgctcaagggcggcgtcatcatggacgtggtcacccccgagcaggctcgc
atcgccgaggacgcgggcgcggtcgccgtgatggcgctcgagcgggtgcccgccgacatc
cgtgcgcaaggcggcgtggcgcgcatgagcgaccccgacctcatccagggcatcatcgac
accgtctcgatccccgtgatggccaaggcgcgcatcggccacttcgtcgaggcgcaggtg
ctgcagtcgctcggcgtcgactacatcgacgagtccgaggtgctcacccccgcggactac
acgcaccacatcgacaagtggaacttcacggttcccttcgtgtgcggcgcgaccaacctg
ggcgaggcgctgcgccgcatctccgagggtgcggccatgatccgctcgaagggcgaggcc
ggcacgggcgacgtgtcgaacgcgaccacgcacatgcgtcagatccgcgcggagatcaag
gcgctcaccgcgctgcccaaggacgagctgtacgtcgccgccaaggagctccaggcgccg
ctgccgctcgtgcaggagatcgccgagaccggcaagctccccgtggtgctcttcaccgcg
ggtggcatcgcgacgcccgccgacgccgcgatgatgatgcagctgggcgccgagggcgtg
ttcgtcggctccggcatcttcaagtcgggcaaccccgcgcagcgcgccgcggcgatcgtc
aaggcgacgacgttcttcgacgacccgtcggtgatcgccgacgtgtcgcgcgggctgggc
gaggcgatggtcggcatcaacgtcgacgaggtccccgagccgcaccgcctcgccgagcgc
ggctggtaa
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