Demequina sediminis: GCM25873_07460
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Entry
GCM25873_07460 CDS
T09136
Name
(GenBank) phytochrome sensor protein
KO
K02653
type IV pilus assembly protein PilC
Organism
dss
Demequina sediminis
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dss02044
]
GCM25873_07460
02035 Bacterial motility proteins [BR:
dss02035
]
GCM25873_07460
Secretion system [BR:
dss02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
GCM25873_07460
Bacterial motility proteins [BR:
dss02035
]
Pilus system
Pilus assembly proteins
GCM25873_07460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Motif
Other DBs
NCBI-ProteinID:
BDZ60955
LinkDB
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Position
697850..699085
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AA seq
411 aa
AA seq
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MATSTATVKKYNYEVRDAQGKIQKGTIEAPSEAAVAGRLKEMGLTTVAITEVKTGGLQSE
IKIPGLTDRIKLKDIAILSRQLATMIAAGLSLLRALSILAEQTENKALAKIVHEVRADVE
AGSSFSQALGKHDTFPPLMVNMVRAGEVGGFLDQVLLSVAQNFESEVALRGKVKSAMTYP
IVVFVIAILAVTGMLLFIVPVFATMFSDLGGELPFLTQILVWMSDALKVLIIPLVIAIFV
GAWLYRKNRYKEGFREKVEPFYLKVPVFGGLTQKIAVARFTRNLASMLRSGVPILQALDI
VGEASGNIVIERAAKAVRESVRTGNSLAKPLAEHPVFPPMVVQMMAVGEDTGALDDMLDK
IADFYDQEVEATTEALTSLIEPIMIAVLGGIVGFMVIGLYMPIFGVFDLVA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctccaccgccaccgtcaagaagtacaactacgaggttcgtgacgcccagggc
aagatccagaagggcaccatcgaggccccgtcggaagctgccgtcgccggacgcctcaag
gagatggggctgaccacggtcgccatcaccgaggtcaagaccggcgggctgcagtccgag
atcaagatcccgggcctgacggatcggatcaagctcaaggacatcgcaatcctgtcgcgt
cagctcgcgaccatgatcgccgcgggtctgtcgctcctgcgcgcgctgtccatcctcgcg
gagcagactgaaaacaaggcgctcgccaagatcgttcacgaggtccgcgcggatgtcgag
gccggctcatctttctcgcaggcgctcggcaagcatgacacattcccgccgctcatggtc
aacatggtgcgcgccggcgaggtcggcggcttcctagaccaggtcctgctgtcggtcgcg
cagaattttgaatccgaagtggcgctccgcggcaaggtgaagtccgcgatgacgtacccg
atcgtcgtgtttgtcatcgcaatccttgcggtgaccggcatgttgctgttcatcgtgccc
gtgttcgcgaccatgttcagcgacctgggcggcgagctgccgttcctgacgcagatcctc
gtgtggatgtccgacgcgctcaaggtgctcatcatccccttggtcatcgcgatcttcgtt
ggcgcgtggctctacaggaagaatcgctataaggaggggttccgcgagaaggtcgaaccg
ttctacctgaaggttccggtcttcggtggtctcacccaaaagatcgcggtcgcgcgcttc
acacgcaacctcgcgtcgatgcttaggtcgggagtgccgattctccaagcgctcgacatc
gtcggtgaggcgagcggcaacatcgtgatcgagcgcgcggccaaagcggtgcgtgaatcc
gtgcgcacaggtaactcactcgcgaagccgctcgcggagcacccggtcttcccgcccatg
gtggtccaaatgatggcggtcggcgaggacaccggagcgctcgacgacatgctcgacaag
atcgccgacttctatgaccaagaggtcgaggcgaccacggaggcgctcacctctctcatc
gagcccatcatgatcgcggtgctcggcggaatcgtcggctttatggtcatcggtctgtat
atgcccatcttcggggtcttcgacctcgtcgcataa
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