Demequina sediminis: GCM25873_07770
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Entry
GCM25873_07770 CDS
T09136
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dss
Demequina sediminis
Pathway
dss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCM25873_07770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dss03400
]
GCM25873_07770
Enzymes [BR:
dss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM25873_07770
DNA repair and recombination proteins [BR:
dss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM25873_07770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
BDZ60986
LinkDB
All DBs
Position
726923..728134
Genome browser
AA seq
403 aa
AA seq
DB search
MCVDSAQPHLDRPFDYSIPDALRGVVDVGSRVRVRFAGRLINGVVTALSDSSDFEGTLAP
IHSSSAMPSYTADAIAFAGQVARRYGGGLWDVLRLMAPPRVAAVEKRDWSGVDHDEQAYA
LAHEALAEEAAAVALDDASLAAGARLVWEAVPDPSRRHGLPIDALLSPAAAVAARGQTAL
VILPDARALAAAGDALVRAGLSRWNARSGGHFAVVHAEDGPAVRFGNYLAAMTGHARIVL
GTRPAALQPVRGLGLLVMWDEASNVYEDPHAPYPHARTVAAMRADEAGAGMLLAGYAPSV
EAMALVAHGWAERADVPRALVRTSTPLMTVIDDQKREAEGASGWHWMPGSVWRGRAMPSR
AAPWGSSCPAPATYAPRRARVAASGPRAPRAVVRCARSPRRRR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcgtcgacagtgcccagccgcacctcgaccggccgttcgactactcgattcccgac
gcgctgcgcggcgtggtcgacgtcgggtcgagggtgcgcgttcgcttcgcggggcggctc
atcaacggtgtggtgaccgcactgtccgactcgagtgacttcgaggggacgctggccccg
atccactcgagctcggccatgccctcgtacacggcggacgcgatcgcgttcgcgggccag
gtggcgcgccgctacggcggcgggctgtgggacgtcctgcggctcatggcgccgcctagg
gtcgctgccgtggagaagagggactggtcgggcgtcgatcacgacgagcaggcctatgcg
ctcgctcacgaggcgcttgccgaggaggccgcggcggtggcgctggacgatgcctcgctc
gcggcgggcgcgcgcctcgtgtgggaggcggtgcccgacccgtcccggcgccacgggctc
ccgatcgacgcgctgttgtctcccgcggctgccgtcgcggcgcgtggccagacggcgctc
gtcatcctgcccgacgcgcgtgctctcgccgcggcgggcgacgccctggtccgcgcgggc
ctgtcgcgatggaatgcgcgctcgggcggacacttcgcggtggtgcacgctgaggacggg
cccgcggtgcgtttcggcaactacctggcggcgatgacgggccacgcacgcatcgtgctg
ggcacgcgccccgccgcgctgcagccggtccggggcctgggactgctggtgatgtgggac
gaggcctcgaacgtgtacgaggacccccacgcgccctacccccacgcccggacggtcgcg
gcaatgcgagccgacgaggctggcgcgggcatgctcctcgcgggctacgcgcccagcgtc
gaggcgatggcgctggtcgcgcacggatgggccgagcgcgccgacgtcccgcgcgctctc
gtgcgcacctcgaccccgctcatgacggtgatcgacgatcagaagcgcgaggccgagggc
gcgagcggctggcactggatgcccggctccgtgtggagggggcgcgcgatgccctcgcga
gcggccccgtggggatcgtcgtgccccgcgccggctacgtacgcgccacggcgtgcgcgc
gttgcggcgagtggtcctcgtgcaccgcgtgcggtggtccgttgcgcaaggagtccgcga
cggcgacgctga
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