Demequina sediminis: GCM25873_09250
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Entry
GCM25873_09250 CDS
T09136
Symbol
rluB
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
dss
Demequina sediminis
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dss03009
]
GCM25873_09250 (rluB)
Enzymes [BR:
dss01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
GCM25873_09250 (rluB)
Ribosome biogenesis [BR:
dss03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GCM25873_09250 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TruB_N
Motif
Other DBs
NCBI-ProteinID:
BDZ61134
LinkDB
All DBs
Position
complement(862915..863616)
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AA seq
233 aa
AA seq
DB search
MLASAGVGSRRKCEDLIEAGRVTVNGEVVDQLGVRVNPDEVVIAVDGARISVDSSHVTVV
LNKPFGVVSTMSDPQGRPALDRYVSGYDERLFHVGRLDAETTGVLLLTNDGELANRLAHP
THGVSKVYVAKVRGRVSKHLCTQLKAGVDLDDGPVRATSCTVLDLAADSSLVQVELHEGR
NRIVRRMLDKVGHPVLELVRTQFGPVRLGTMAPGEVRELTPTEVGRLMDAAGM
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtgctggcctcagcgggggtgggatcgcgccgcaagtgcgaggacctcatcgaggcgggc
cgcgtgaccgtcaacggcgaggtggtcgaccagctgggcgtgcgcgtcaaccccgacgag
gtcgtcatcgcggtcgatggcgcgcgcatctcggtggactcgtcgcacgtcacggtggtc
ctcaacaagccgttcggcgtcgtgagcaccatgagcgacccgcagggccgtcccgccctc
gaccgctacgtgagcggctacgacgagcggctcttccacgtgggccgcctcgacgcggag
accacgggcgtgctgctgctcaccaacgacggcgagctcgcgaaccgcctcgcgcacccc
acccacggcgtgtccaaggtgtacgtcgcgaaggtgcgcggccgcgtgtcgaagcacctg
tgcacgcagctcaaggcgggcgtcgacctcgacgacggcccggtgcgcgcgacgtcgtgc
accgtgctcgacctcgccgcggactcctcgctcgtgcaggtcgagctgcacgaggggcgc
aaccgcatcgtgcgccgcatgctcgacaaggtgggtcaccccgtcctcgagctggtgcgc
acccagttcggtcccgtgcggctcggcacgatggcgcccggcgaggtgcgcgagctcacc
ccgaccgaggtgggccggctcatggacgccgcgggcatgtga
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