Demequina sediminis: GCM25873_10460
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Entry
GCM25873_10460 CDS
T09136
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
dss
Demequina sediminis
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dss03009
]
GCM25873_10460
Enzymes [BR:
dss01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
GCM25873_10460
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
GCM25873_10460
Ribosome biogenesis [BR:
dss03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GCM25873_10460
23S rRNA modification factors
GCM25873_10460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
SYY_C-terminal
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
BDZ61255
LinkDB
All DBs
Position
complement(980158..980979)
Genome browser
AA seq
273 aa
AA seq
DB search
MRLDRALVARGLARSRTHAQALIDAGDVTVAGIVVSKPAHEVGDDAVVTVASSDSYVSRA
AHKLAGALDSCPELSVEGRLALDVGASTGGFTQVLLQRGARRVHAIDVGHGQLAPSIAGD
PRVVAVEGLNARELTPAHLGGDTPDLVVADVSFISLTLLVDPLVRTCAEDADLLLMVKPQ
FEVGRERLGKGGVVTRPQDRARAVAAVAASLRTAGLDLHRVARSPLPGPHGNVEFFVWAS
RTWQARDRGRERPQPLTESLVNAAIEEQTGGRP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggaccgcgcgctcgtcgcgcgcgggctggcgaggtcgcgcactcacgcgcag
gcgcttatcgacgccggcgacgtcaccgtcgccggcattgtcgtctccaagcccgcacat
gaggtgggggacgatgccgtggtcaccgtggcatcgtccgattcctacgtctcccgcgcg
gcccacaagctggccggcgcgctcgactcctgcccggagctttccgtggagggaaggctc
gcgctcgacgtgggcgcctcgacgggcggcttcacgcaggtgctgctccagcggggcgcg
cgtcgcgtccacgcgatcgacgtgggtcacggccagctcgccccgtcgatcgccggtgac
cctcgcgtggtcgcggtcgagggtctcaacgcgcgcgagctgactcccgcgcacctgggc
ggcgacacgccggacctggtggtcgcggacgtgtcgttcatctcgctcaccctgctggtc
gatccgctcgtgcgcacgtgcgccgaggacgcggacctgctgctgatggtcaagccgcag
ttcgaggtcggccgcgaacggctcggcaagggcggagtcgtgacccgcccccaggaccgc
gcgcgagcggtcgccgcggtcgccgcctcgctgcggaccgcggggctcgaccttcatcgc
gtcgcccgctcaccgctgcccggtcctcacggcaacgtggagttcttcgtgtgggcctcg
cggacgtggcaggctagggaccgcggtcgcgagcggccgcagccgttgacagaatccctc
gtcaacgcggcaatcgaggagcagacgggaggaagaccatga
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