Demequina sediminis: GCM25873_11500
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Entry
GCM25873_11500 CDS
T09136
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
dss
Demequina sediminis
Pathway
dss00300
Lysine biosynthesis
dss00550
Peptidoglycan biosynthesis
dss01100
Metabolic pathways
dss01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GCM25873_11500 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GCM25873_11500 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GCM25873_11500 (murF)
Enzymes [BR:
dss01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
GCM25873_11500 (murF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BDZ61359
LinkDB
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Position
complement(1077971..1079329)
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AA seq
452 aa
AA seq
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MRPVTAQWVANAAGGTLAADVDTLVEGVDKDSRDVRPGWLYAAFVGERSDGHDFVPQALA
NGASLCLVSRPVDGPHVLVGDVTAALGALARAYLALLRTEGDLTVIGITGSNGKTTTKDL
LAQVLPDVVAPVGSFNNEIGLPLTVLRADSSTRHLVLEMGASGLGHIAYLTSIAPLDVAV
ALTVGTAHMGEYASPDDVAVAKSEIVRGLVPGGVAVLNADDARVAGMARLAERVVTFGVS
TGDHRAVGLTTERGRASFAIGDLPRRTLTLVGEHHVTNALAAFAVAVECGVDGAAAWEAI
AAARPLSAHRMALTERADGVTIIDDAYNASIESVRAALRALKLVADGGRTVAVLGEIREL
GDASATIHSEIGTDVVRLRIDHTIIVGDGARPAYVAAVREGSWGDEAAFVATIGEARELL
DRMLRPGDTVLVKASHGSGLWELADQLVGGTA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgaggccggtcacggctcaatgggtcgcgaatgcggcgggcgggacgctcgccgccgac
gtggacaccttggtcgagggcgtcgacaaggactcgcgcgacgtgcgtccaggctggctg
tacgccgccttcgtgggggagcggtccgacggccacgacttcgtgccgcaggcgctcgcc
aacggggcctcgttgtgcctcgtgtcgcgccccgtcgacggcccccacgtgctcgtcggc
gacgtcacggcggcgctcggcgcactcgcgcgggcgtatctggcgctgctgcggaccgag
ggcgacctcaccgtcatcgggatcaccggctcgaatggcaagaccacgacgaaggacctg
ctggcacaggtgttgcccgacgtggtcgcgccggtcggctcattcaacaacgagatcggc
ctgccgctcacggtcctgcgtgccgactcctcgacccgccacctcgtgctcgagatgggg
gcgagcggtctcggccacatcgcgtacctcacctcgatcgcccctctcgacgtcgcggtg
gcgctcaccgtgggcaccgcccacatgggcgagtacgcctcgcccgacgacgtcgcggtg
gccaagagcgagatcgtgcgcgggctcgtgcccggcggcgtcgcggtcctcaacgcggac
gatgccagggtcgccgggatggcgagactggccgagcgcgtggtgacctttggcgtgtcg
accggcgaccaccgcgccgtcgggctcacgaccgagcgtggccgtgcctcgttcgcgatc
ggcgacctcccgcggcgcaccctcacgctcgtgggcgagcaccacgtcaccaacgctctg
gccgccttcgcggtggccgtcgagtgtggagtcgacggtgccgcggcgtgggaggcgatc
gcggcggcgcgaccgctgtccgcacaccgcatggcgctcacggagcgcgccgacggcgtc
acgatcatcgacgacgcgtacaacgcgtcgatcgaatccgtgagggccgccctgcgcgcc
ctcaagctcgtcgccgacggcggccgcactgtcgccgtgctgggcgagatccgcgagctg
ggagacgcctcggcgaccatccactcggagatcggcacggacgtcgtgcgcctgcgcatc
gaccacacgatcatcgtgggagacggcgcgcggcccgcgtatgtggcggccgtgagggag
ggttcgtggggtgacgaggcggccttcgtcgctacaatcggcgaggcgcgagagctcctc
gatcgcatgctgcggccgggggacaccgtgctcgtcaaggcctcgcacggctccggcctg
tgggagctcgccgatcagctcgtgggaggaaccgcatga
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