Demequina sediminis: GCM25873_12220
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Entry
GCM25873_12220 CDS
T09136
Name
(GenBank) hypothetical protein
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
dss
Demequina sediminis
Pathway
dss00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GCM25873_12220
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dss01007
]
GCM25873_12220
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dss03016
]
GCM25873_12220
Enzymes [BR:
dss01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
GCM25873_12220
Amino acid related enzymes [BR:
dss01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
GCM25873_12220
Transfer RNA biogenesis [BR:
dss03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GCM25873_12220
Prokaryotic type
GCM25873_12220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
DUF1198
Motif
Other DBs
NCBI-ProteinID:
BDZ61431
LinkDB
All DBs
Position
complement(1146153..1147100)
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AA seq
315 aa
AA seq
DB search
MLRMSTLFLRTLREDPADAEVASHKLLVRAGYIRRAAPGIYSWLPLGLRVLAKVEAVVRE
EMNAAGGQEVHFPALLPKEPYEATGRWTEYGQGIFRLVDRKGGDYLLAPTHEEMFTLLVK
DLYSSYKDLPLTIYQIQTKYRDEARPRAGLLRGREFIMKDSYSFDVTDEGLDASYAAQRE
AYIRIFDRLGLEYVIVTATSGAMGGSKSEEFLSPTAIGEDTYVRSPGGYAANVEAVTTPV
PASLDWADAPAAHVEDTPDTPTIATLVDHANAAHPRADRAWTAADTLKNVVVALTAPAGS
AACSWWASPATERRT
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcatgtccacgctcttcctccgcacgctgcgtgaggaccccgccgacgccgag
gtcgcgtcgcacaagctcctggtgcgcgccggatacatccggcgtgccgcccccggcatc
tactcgtggctcccgctcggcctgcgtgtgctcgccaaggtcgaggcggtcgtccgcgaa
gagatgaacgcagcgggcggccaggaggtgcactttcccgcgctgttgcccaaggagcct
tacgaggccacgggccgctggacggagtacggacagggcatcttccgcctcgtggaccgc
aagggtggcgactacctgctcgcgcccacgcacgaggagatgttcacgctgctcgtcaag
gacctgtactcgtcgtacaaggacctaccgctgacgatctaccagatccagaccaagtac
cgcgacgaggccaggccccgggccggcctgctgcgcggacgcgagttcatcatgaaggac
tcgtattccttcgacgtgaccgacgagggcctcgacgcctcctatgcggcccagcgcgag
gcatacatccgcatcttcgaccggctgggactcgagtacgtgatcgtcacggccacgtcg
ggagcgatgggtggctccaagtcggaggagttcctgtcgcccaccgcgatcggcgaggac
acctacgtgcggtcgcccggcggctacgccgcgaacgtcgaggcggtcaccacgcccgtg
ccggcgtcgctcgactgggcggacgcaccggccgcgcacgtcgaggacactcccgacacg
cccacgatcgcgacgctcgtcgaccacgcgaacgccgcccatccgcgcgcggaccgtgcg
tggacggcggccgacaccctcaagaacgtcgtcgtggcgctgacggcacccgcggggagc
gcagcctgctcgtggtgggcatccccggcgaccgagaggcggacatga
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