Demequina sediminis: GCM25873_12250
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Entry
GCM25873_12250 CDS
T09136
Symbol
gcpE
Name
(GenBank) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
dss
Demequina sediminis
Pathway
dss00900
Terpenoid backbone biosynthesis
dss01100
Metabolic pathways
dss01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GCM25873_12250 (gcpE)
Enzymes [BR:
dss01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
GCM25873_12250 (gcpE)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
GCM25873_12250 (gcpE)
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Motif
Pfam:
GcpE
Asp_Glu_race
Aldolase
Zn_ribbon_9
Zn_ribbon_LysW
FTCD_C
DHquinase_I
Motif
Other DBs
NCBI-ProteinID:
BDZ61434
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All DBs
Position
complement(1148591..1149724)
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AA seq
377 aa
AA seq
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MPALPAPVLSPRRKTRKIKVGDVYVGGDAPISVQSMCTTKTHDVNATLQQIAELTASGCD
IVRVACPTQDDADALEAIARKSNIPVIADIHFQPKYVFAAIEAGCAAVRVNPGNIKKFDD
QVKEIAQAAKDHGTSIRIGVNAGSLDPRLLAKYGKATPEALVESAVWEASLFEEHGFHDF
KISVKHNDPVVMVRAYEMLSERGDWPLHLGVTEAGPAFQGTIKSATAFGALLSQGIGDTI
RVSLSAPPVEEVKVGIQILQSLNLRPRKLEIVSCPSCGRAQVDVYELAEKVTAGLEGMEV
PLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVIKTVPEKDIVETLIEEAMKLA
ETMEPVDGASPQVIAAS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgctgccggcgcccgtgctgtccccgcgacgcaagacccgcaagatcaaggtg
ggcgacgtgtacgtgggcggagacgcgcccatcagcgtgcagtcgatgtgcaccaccaag
acgcacgacgtcaacgcgacgctccagcagatcgcggagctcaccgcgtcgggctgcgac
atcgttcgcgtcgcgtgtcccacgcaggacgacgccgacgcgctcgaggcgattgcgcgc
aagtccaacatccccgtgatcgccgacatccacttccagcccaagtacgtgttcgccgcg
atcgaggccggctgcgccgcggtgcgcgtcaacccgggcaacatcaagaagttcgacgac
caggtcaaggagatcgcgcaggccgcgaaggaccacggcacgtcgatccgcatcggcgtc
aacgccggctcgctcgacccgcggctgctcgccaagtacggcaaggcgacccccgaggca
ctcgtcgagtccgcggtgtgggaggcgagcctgttcgaggagcacggcttccacgacttc
aagatctcggtcaagcacaacgaccccgtcgtgatggtgcgcgcctacgagatgctgtcg
gagcgcggcgactggccgctgcacctgggagtgaccgaggccggccccgccttccagggc
accatcaagtccgccaccgcgttcggtgcgctcctcagccagggcatcggcgacacgatc
cgcgtgtccctctccgcccctcccgtcgaggaggtgaaggtgggcatccagatcctccag
tcgctcaacctgcgcccccgcaagctcgagatcgtgtcgtgcccgtcgtgcgggcgcgct
caggtggacgtctacgagctcgcggagaaggtcaccgcgggactcgagggcatggaggtg
ccgctgcgcgtcgcggtcatgggttgcgtggtcaacgggccgggcgaggcgcgcgaggcg
gaccttggcgtggcctcgggcaacggcaagggtcagatcttcgtcaagggtgaggtcatc
aagaccgttcccgagaaggacatcgtggagacgctcatcgaggaggcgatgaagctcgcc
gagacgatggagccggtcgacggcgcgagcccgcaggtgatcgcggcgtcatga
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