Demequina sediminis: GCM25873_12710
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Entry
GCM25873_12710 CDS
T09136
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
dss
Demequina sediminis
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dss03036
]
GCM25873_12710 (smc)
Chromosome and associated proteins [BR:
dss03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
GCM25873_12710 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BDZ61480
LinkDB
All DBs
Position
complement(1184901..1188488)
Genome browser
AA seq
1195 aa
AA seq
DB search
MHLKTLTLRGFKSFASATTLEFEPGVTCVVGPNGSGKSNVVDALAWVMGEQGAKTLRGGQ
MADVIFAGTSGRAPLGRAEVSLTIDNTDGALPIDYTEVTISRTLFRSGGSEYAINGSPCR
LMDIQDLLSDSGLGREMHVIVGQGQLDAVLRATPEDRRHFIEEAAGILKHRRRKDKALRK
LDSMQANLTRVQDLTGEIRRQLGPLGKQAEVARQAQRIQVDVRDARSRLLADDLATLTES
MHKDHADETALLERRAAVDRALGEARAQLAELERLSAEATPALTKANDTFYRLSAIRERL
RNLATLAEERVRMLGTAIDAAPPTDLVDLDEQVERARAARVELDAEVAAAELELEAAIEA
RKDAETQAFASDRHHANLLRSVADRREGVARLAGQVAAKRSRVESTEAEIGRLQEQLAAA
EKRAHDATGEFQVVETSVASVEAGEDDLDIQHEAATEEWERAKAVLAELKDALHAAMRER
DTWAARGEALELSLVRKDGAGALLASGVKSVRGTVASLIDVRDDAEDAIAGALGPLADAL
AADSVEDAVDAIRWLRDEDAGRARFVVADATAAAHNPDIELPAGAAWASDLVDGPSGLVD
AVKALVSGVAVVDDLAAARALVSAHREVTAVTRRGDLLGGRHASGGAGDAPSIIHVQAAF
DDARERRDAAAIEVERTQERLRAAEEAEAETRGAHERTLARLNEADARMAAVAEQLGRLG
AQARAAKAEAERHAVQLEQAHGRMEIDSEELASLTERLAAAQAEPEQFEADTRQAQERRD
EDEAAARVARAKETEARLALRTCEERARALAARAESLERAAVAEREARVRAEEAAARRER
QAVAAREVIAGSRDALALIDVSVQRADDARAAVEADRAERTGRLAEVRRTVEELATEYSR
LTDDAHRDEVARAEQKVRLEQLRQRAVDELGMDPDRLIEEYGPHVGVPVVDDDRTDDETG
NDDASDDRAEPRTTPYVREAQEKRLRQAERAMNQLGRVNPLALEEFAALEERHKFLTDQL
ADIKRSREDLLQIVKEIDERVETIFAQAFADTSAQFERIFPRLFPGGEGRIVLTDPSNML
ETGLEVEARPAGKKVKRLSLLSGGERSLTAVALLVSIFKARPSPFYVMDEVEAALDDVNL
GRLLEIFKELQEDSQLIVITHQKRTMEIADSLYGVTMRGDGVTTVISQRLTDDAA
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgaagacgctgacgctgaggggattcaagtccttcgcgtcggcgaccacgctg
gagttcgagccgggcgtcacgtgcgtcgtgggcccgaacggctcgggcaagtccaacgtg
gtggacgcgctcgcgtgggtcatgggtgagcagggcgccaagacgctgcgcggcgggcag
atggccgacgtgatcttcgccggcacgtcggggcgcgcgccgctgggccgtgccgaggtc
tcgctcacgatcgacaacaccgacggcgcgctgccgatcgactacaccgaggtcacgatc
agccgcacgctgttccgctcgggcggctcggagtatgcgatcaacgggtcgccgtgccgt
ctcatggacatccaggacctgctgtccgactcgggactcggccgcgagatgcacgtgatc
gtgggtcagggccaactcgacgccgtcctgcgcgcgacccccgaggaccgccgccacttc
atcgaggaggccgccggcatcctcaagcaccgccgccgcaaggacaaggcgctgcgcaag
ctcgactcgatgcaggccaacctcacgcgcgtccaggacctgacgggtgagatccggcgc
cagctggggccgctgggcaagcaggccgaggtcgcgcgccaggcgcagcgcatccaagtc
gacgtgcgcgacgcgcgctcgcggctcctcgcggacgacctcgcgaccctcaccgagtcg
atgcacaaggaccacgccgacgagaccgcgctgctcgagcgccgcgccgccgtggatcgc
gcgctgggcgaggcgcgcgcgcagctcgccgaactcgagcggctgtccgccgaggccacc
cctgcgctcaccaaggccaacgacacgttctatcgcctcagcgcgatccgcgagcggctg
cgcaacctcgcaacgctcgccgaggagcgcgtgcggatgctcggcacggccatcgacgcc
gccccgcccactgaccttgtcgacctcgacgagcaggtcgagcgcgctcgcgccgcacgc
gtcgagctcgatgccgaggtcgccgccgccgaactcgagctcgaggccgcgatcgaggcg
cgcaaggacgccgagacccaggccttcgcctcggaccgtcaccatgcgaacctgctgcgc
tcggtcgcggaccgtcgcgagggcgtcgcacgcctcgccggccaggttgcggccaagcgc
tcgcgcgtcgagtcgacggaggcggagatcggtcgcctgcaggagcagctcgccgcggcg
gagaagcgtgcgcacgacgccacgggcgagttccaggtcgtcgagacctcggtggcctcc
gtggaggcgggcgaggacgacctcgatattcagcacgaggccgccaccgaggagtgggag
cgcgccaaggccgtgctcgccgagctcaaggacgcgctccacgctgccatgcgcgagcgc
gacacgtgggccgcgcgcggcgaggccctcgagctgtcgctggtccgcaaggacggcgca
ggcgccctgctcgcgagcggcgtgaagtccgtgcgcgggacggtcgcctcgttgatcgac
gtgagggacgatgccgaggacgccatcgcgggtgcgcttggtccgctcgcggacgccctc
gccgcggactctgtcgaggacgcggtcgacgcgatccggtggctgcgcgacgaggacgcc
gggcgagccaggttcgtggtcgccgacgcgacggcggcggcgcacaaccccgacatcgag
cttccggccggcgcggcgtgggcctccgacctggtcgacgggccctccggcctggtcgat
gcggtgaaagcgctggtctcgggcgtggccgtggtcgacgacctcgccgcggcgcgcgcg
ctcgtctccgctcatcgcgaggtcacggctgtcacgcgccgcggggacctgctgggcgga
cgacacgcgtcggggggcgcaggagacgcgcccagcatcatccatgtgcaggccgccttc
gacgacgcgcgcgagcgacgcgacgccgccgcgatcgaggtcgagcgcacgcaggagcgc
ctgcgagccgccgaggaggccgaggcggagaccaggggagcgcacgagcgcacgctcgcc
cgcctcaacgaggctgatgcgcgcatggccgcggtcgcggagcagctcggccggctgggg
gcgcaggcgcgcgcggcgaaggcggaggccgagcgccacgcggtccagctcgagcaggcg
cacgggcgcatggagatcgactcggaggagctcgcgagcctcaccgagcgcctcgcggcc
gcgcaggccgagcccgagcagttcgaggcggacacgcgccaggcccaggagcggcgcgac
gaggacgaggctgccgcaagggtcgcccgtgccaaggagaccgaggcccgtctcgcgctg
cgcacgtgcgaggagcgcgcccgcgccctcgcggcccgcgccgagagcctcgagcgcgcc
gcggtcgccgaacgcgaggcgcgcgtgcgcgccgaggaggccgctgctcgccgagagcgc
caggccgtcgcggcgcgcgaggtgatcgcgggcagccgcgacgccctcgcccttatcgac
gtgtcggtgcagcgcgcggacgatgccagggccgccgtcgaggccgaccgcgccgagcgc
acgggtcggctggccgaggtgcgccgcaccgtcgaggagctcgcgacggagtactcgcga
ctcacggatgacgcacaccgcgacgaggtcgcgcgcgccgagcagaaggtgcgtctcgag
cagctgcgtcagcgcgcggtcgacgagctggggatggatccggaccggctcatcgaggag
tacggcccccacgtgggggtgccggtcgtcgacgacgaccgcacggacgacgagacgggc
aacgacgacgcgtccgacgatcgcgccgaaccccgcacgacgccctacgtgcgtgaggcc
caggagaagcgcctgcgccaggccgagcgcgcgatgaaccagctggggcgcgtcaacccg
ctcgcgctcgaggagttcgccgcgctcgaggagcgtcacaagttcctcaccgaccagctc
gcggacatcaagcgctcgcgcgaggatctcctgcagatcgtcaaggagatcgacgagcgc
gtcgagaccatcttcgcgcaggccttcgcggacacgtccgcccaattcgagcgcatcttc
ccgcgcctgttccccggcggcgagggacgcatcgtcctcaccgacccctcgaacatgctg
gagacgggcctcgaggtcgaggcgcgtcccgcgggcaagaaggtcaagcgtttgtccctc
ctgtcaggcggcgagcgctcgctcacggcggtcgcgctgctggtgtcgatcttcaaggcg
cgccccagccccttctacgtgatggacgaggtcgaggcggcgctcgacgacgtcaacctg
ggacgcctcctcgagatcttcaaggagctgcaggaggactcgcagctgatcgtcatcacg
caccagaagcgcaccatggagatcgccgactcgctgtacggcgtcacgatgcgcggcgac
ggcgtcaccacggtcatcagccagcgcctcaccgacgacgccgcctga
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