Demequina sediminis: GCM25873_13070
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Entry
GCM25873_13070 CDS
T09136
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dss
Demequina sediminis
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dss03400
]
GCM25873_13070 (sbcD)
DNA repair and recombination proteins [BR:
dss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM25873_13070 (sbcD)
Archaeal homologous recombinant proteins
GCM25873_13070 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BDZ61516
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Position
1219957..1221177
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AA seq
406 aa
AA seq
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MRLLHTSDWHIGRTFHGHSTDEHLSLVLDALARAVAEHAIDAVIVAGDIFDSSTPKADAF
TLLNRAVGAIRNAGATVILTSGNHDGPARLGHMAEFAAHGGVHLRTQLSRLAEPVTLSDT
HGDLLIYGIPYVHPEFLRAAYPAFTGGTHAEALAFAMDLIREDAAARSGSQPPRYVVASH
CFCSGEGAVTHDTTEDSGRAEERDISRGGLNIVPPSVFAGATYTALGHIHSRATLTPSVR
YSGAPLRFSFGEISGAKGAWIVDIGAPGGAPGGAPETTPDITWLDLPVPRRAVRLTGALE
HLLADPSHAHAEDAWVEVILTDDQLPREAMRALQGRFPHAVTLTHRPSTRHDHGDTTYAE
RVEGRSDLEIVDEFLGYVRNGAALSAPERALVTDALGALEARESAR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttctccacacgagtgactggcacatcggccgcacgttccacgggcactcgacg
gacgagcacctgagcctggtgctcgatgccttggcgcgcgcggtggcggagcacgcgatc
gacgcggtgatcgtcgccggcgacatcttcgactcgtcgacccctaaggcggacgccttc
accctgcttaacagggcggtcggcgcgatccgcaacgcgggcgccacggtcatcctgacc
tcgggcaatcacgacggtccggcccggctcggccacatggcggagttcgcggcgcacggc
ggcgtgcacctccgcacgcagctgagccgcctcgcggagcccgtgaccctgagcgacacc
cacggcgacctcttgatctacggcatcccgtacgtccaccccgagttcctgcgcgccgcg
tacccggccttcaccggcggcacgcatgccgaggcgctcgccttcgcgatggacctcatc
agggaggacgccgctgcgaggtcgggctcacagccgccgcgctacgtggtcgcgtcccac
tgcttctgctcgggcgagggcgccgtcacgcacgacaccaccgaggactcgggccgcgcc
gaggagcgcgacatctcccgcggcggcctcaacatcgtgccgccgagcgtcttcgcgggc
gcgacctacacggccctcggccacattcactcccgcgcgaccctcaccccctccgtccgc
tacagcggcgcgccgctgcgcttcagcttcggcgagatcagcggcgccaagggcgcgtgg
atcgtggacatcggcgcacccgggggcgccccaggcggcgccccagaaaccacgcccgac
atcacctggctcgacctcccggtgccgcgccgcgcggtccgcctcacgggcgcgctcgag
cacctcctcgcggacccctcccacgctcatgcggaggacgcgtgggtcgaggtgatcctc
accgatgaccagctcccgcgcgaggccatgcgcgccctccagggccgcttcccgcacgcg
gtgaccctcacgcatcgtccctccacgcgccacgaccacggcgacaccacctacgcggag
cgcgtcgaggggcgcagcgacctcgagatcgtcgacgagttcttgggctacgtccgcaac
ggcgccgcgctcagcgcccccgagcgcgcgctcgtcaccgacgcgctgggggcactcgag
gcgcgggagtccgcgcgatga
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