KEGG   Demequina sediminis: GCM25873_13070
Entry
GCM25873_13070    CDS       T09136                                 
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
dss  Demequina sediminis
Brite
KEGG Orthology (KO) [BR:dss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dss03400]
    GCM25873_13070 (sbcD)
DNA repair and recombination proteins [BR:dss03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GCM25873_13070 (sbcD)
    Archaeal homologous recombinant proteins
     GCM25873_13070 (sbcD)
SSDB
Motif
Pfam: Metallophos SbcD_C Metallophos_2
Other DBs
NCBI-ProteinID: BDZ61516
LinkDB
Position
1219957..1221177
AA seq 406 aa
MRLLHTSDWHIGRTFHGHSTDEHLSLVLDALARAVAEHAIDAVIVAGDIFDSSTPKADAF
TLLNRAVGAIRNAGATVILTSGNHDGPARLGHMAEFAAHGGVHLRTQLSRLAEPVTLSDT
HGDLLIYGIPYVHPEFLRAAYPAFTGGTHAEALAFAMDLIREDAAARSGSQPPRYVVASH
CFCSGEGAVTHDTTEDSGRAEERDISRGGLNIVPPSVFAGATYTALGHIHSRATLTPSVR
YSGAPLRFSFGEISGAKGAWIVDIGAPGGAPGGAPETTPDITWLDLPVPRRAVRLTGALE
HLLADPSHAHAEDAWVEVILTDDQLPREAMRALQGRFPHAVTLTHRPSTRHDHGDTTYAE
RVEGRSDLEIVDEFLGYVRNGAALSAPERALVTDALGALEARESAR
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgcgccttctccacacgagtgactggcacatcggccgcacgttccacgggcactcgacg
gacgagcacctgagcctggtgctcgatgccttggcgcgcgcggtggcggagcacgcgatc
gacgcggtgatcgtcgccggcgacatcttcgactcgtcgacccctaaggcggacgccttc
accctgcttaacagggcggtcggcgcgatccgcaacgcgggcgccacggtcatcctgacc
tcgggcaatcacgacggtccggcccggctcggccacatggcggagttcgcggcgcacggc
ggcgtgcacctccgcacgcagctgagccgcctcgcggagcccgtgaccctgagcgacacc
cacggcgacctcttgatctacggcatcccgtacgtccaccccgagttcctgcgcgccgcg
tacccggccttcaccggcggcacgcatgccgaggcgctcgccttcgcgatggacctcatc
agggaggacgccgctgcgaggtcgggctcacagccgccgcgctacgtggtcgcgtcccac
tgcttctgctcgggcgagggcgccgtcacgcacgacaccaccgaggactcgggccgcgcc
gaggagcgcgacatctcccgcggcggcctcaacatcgtgccgccgagcgtcttcgcgggc
gcgacctacacggccctcggccacattcactcccgcgcgaccctcaccccctccgtccgc
tacagcggcgcgccgctgcgcttcagcttcggcgagatcagcggcgccaagggcgcgtgg
atcgtggacatcggcgcacccgggggcgccccaggcggcgccccagaaaccacgcccgac
atcacctggctcgacctcccggtgccgcgccgcgcggtccgcctcacgggcgcgctcgag
cacctcctcgcggacccctcccacgctcatgcggaggacgcgtgggtcgaggtgatcctc
accgatgaccagctcccgcgcgaggccatgcgcgccctccagggccgcttcccgcacgcg
gtgaccctcacgcatcgtccctccacgcgccacgaccacggcgacaccacctacgcggag
cgcgtcgaggggcgcagcgacctcgagatcgtcgacgagttcttgggctacgtccgcaac
ggcgccgcgctcagcgcccccgagcgcgcgctcgtcaccgacgcgctgggggcactcgag
gcgcgggagtccgcgcgatga

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