Demequina sediminis: GCM25873_13250
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Entry
GCM25873_13250 CDS
T09136
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dss
Demequina sediminis
Pathway
dss03030
DNA replication
dss03430
Mismatch repair
dss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM25873_13250
03430 Mismatch repair
GCM25873_13250
03440 Homologous recombination
GCM25873_13250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dss03032
]
GCM25873_13250
03400 DNA repair and recombination proteins [BR:
dss03400
]
GCM25873_13250
Enzymes [BR:
dss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM25873_13250
DNA replication proteins [BR:
dss03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM25873_13250
DNA repair and recombination proteins [BR:
dss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM25873_13250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
ARMH5
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BDZ61534
LinkDB
All DBs
Position
1239431..1240624
Genome browser
AA seq
397 aa
AA seq
DB search
MAGFAVVDLETTGFAYNHSDRVCEIAVVLVDPEGKREDSYTTLINPQRDLGAQHIHGIDA
RDARLAPTFGQIAGDLTGMLAGRVLVAHNSAFDASFLTAEYARAGWPLDLTRDMTLCTMR
MAREFGAPAKLSACCDHFGIPLDNAHAALADATATASLLAAYMERSPRRDVWDQWLAFGE
SIAWPTPPRLATRAVPRGASSPGSSLLADVTRRLAATAHSDVPGGDEYLDLLDRVLLDRR
ISTPERRALEGLAGALGLGVHDVAVLHRKYLLGVVDLACEDAIFSADEQAAVIQLASLLE
LQDLEVEALLADAASRVATASTQVELHAGDMVVLTGMSMDRKRELTAIAQSRGLVVWPGV
KKGVRAVVAKDPASQSGKASKARAYGIPVVGEDVLTA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggccggattcgccgtcgtcgatctggagaccaccggcttcgcatacaaccactccgac
cgcgtctgcgagatcgcggtcgtgctcgtcgacccagaaggcaagcgggaggactcgtac
acgacgctgatcaatccccagcgcgacctgggcgcgcagcacatccacggaatcgacgcc
agggacgcgcgtctcgcgcccacattcggccagatcgccggcgacctcacgggcatgctc
gcgggacgagtcctcgtcgcgcacaacagcgcgttcgatgcgtcgttcctcacggccgag
tatgcgcgcgccggctggccgctggacctcacccgcgacatgacgctgtgcacgatgcgc
atggcgcgtgagttcggcgcaccggccaagctcagcgcgtgttgcgaccactttggcatc
ccgctcgacaatgcccacgccgcactggcggacgcgacggccaccgcctccctgctcgcc
gcctacatggaacgctcgccccggcgggacgtgtgggaccagtggctcgccttcggagag
tcgatcgcctggcccacgcccccgcgactggccacgcgggcggtcccgagaggggcatcg
tccccaggaagcagcctgctcgcggacgtgacgcgacgcctcgcagcaaccgcgcactcg
gacgtcccgggcggcgacgagtacctcgacctgctcgatcgcgtactgctcgatcgaagg
atctccacgcctgagcgccgcgcgctcgagggactcgcgggagcgctgggactcggcgtg
cacgatgtcgcggtcctccaccgcaagtacctcctgggtgtggtggaccttgcgtgcgag
gacgccatcttcagcgccgacgagcaggccgcggtcatccagcttgcctccctgctggaa
ctgcaggaccttgaggtcgaggcgctgctcgcggatgcggcctcccgagtggcgaccgca
tcgacccaggtagagctgcacgcgggtgacatggtggtacttaccgggatgtcgatggac
cgcaagcgcgaactcaccgcgatcgcgcagtcgcgcgggctggtggtgtggcccggcgtc
aagaagggcgtgcgggccgtcgtggcaaaggatcccgcgtcgcagtcgggtaaggcaagc
aaggctcgcgcgtacgggattcccgtggtgggcgaggacgtgctcacggcgtga
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