Demequina sediminis: GCM25873_13770
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Entry
GCM25873_13770 CDS
T09136
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dss
Demequina sediminis
Pathway
dss00300
Lysine biosynthesis
dss00470
D-Amino acid metabolism
dss01100
Metabolic pathways
dss01110
Biosynthesis of secondary metabolites
dss01120
Microbial metabolism in diverse environments
dss01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GCM25873_13770
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GCM25873_13770
Enzymes [BR:
dss01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GCM25873_13770
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Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BDZ61586
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Position
complement(1292246..1293754)
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AA seq
502 aa
AA seq
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MGEAVTADAVAGLTPLTGRTEPWMEELLAHPERCAALIEEYGSPVNVLDFAPLGRNAAEL
VEAAASEGVRLGVYVARKANKALGLVHEARRVGLGIDVASLAELTQCLDVGFAADDMILT
AAVKSTALIEAALAAGVLVSLDNADEAEDVASIARARGVTARVAPRLASSDPAIAPTRFG
MTARDWDRVVGEAGGGGTPLRLEGIHFHLNGYSARERAIVLREALTWTDALRSRGHAIAF
IDMGGGVPMRYLEDREQWRRFWEALEGDREEVLTWRGDRLGLQDPRADRPSASVYPYWQE
RVRGEWLRDVLAAPAGEGSTVARELAARGLELRCEPGRSVLDGCGLTLASVAFRKSTSDG
VPLVGLHMNRTQVRSTSADFLVDPRWVRPADTRDTSEPFEGFLVGAYCVEEELLLRRRLC
FPDGVARGDIAAFVNTGGYLMHILESASHQLPLAATVVKRRPQAASGSSPGSESAWVRDG
IDAVGATGAASATGDVPWGPMP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggcagtgacggcggacgcggtcgcgggactgaccccgctgacggggcgcacc
gagccgtggatggaggagctgctcgcgcacccggaacggtgcgccgcgctcatcgaggag
tacggctcgccggtcaacgtgctcgatttcgcgccgctggggcgcaacgcggccgagctc
gtggaggccgcggcttccgagggtgtgcggctcggggtgtacgtggcgcgcaaggcgaac
aaggcgctggggctggtgcacgaggcccggcgcgtggggctcggcattgatgtggcgtcg
ctcgcagagctcacgcagtgcctcgacgtggggttcgcggcggacgacatgatcctcacg
gccgccgtgaagtcgaccgcgctgatcgaggcggcgctcgcggccggggtgctggtgagc
ctcgacaacgcggatgaggcggaggacgtcgcgagcatcgctcgcgcacggggcgtgacg
gcgcgggtcgcgccgaggctggcctcgtccgatcccgcgattgcgcccacgcgcttcggg
atgacggcacgcgactgggaccgcgtggtgggcgaggcgggcggaggcggcaccccgctg
cgcctcgagggcatccacttccacctcaacgggtacagcgcgcgcgagcgcgccatcgtg
ctgcgcgaggcgctcacgtggacggacgcgttgcgatcccgcgggcacgcgatcgcgttc
atcgacatgggaggcggggtgccgatgcgctacctcgaggaccgcgagcagtggcgccgc
ttctgggaggccctggagggcgaccgcgaggaagtgctgacgtggcgcggcgaccggctg
gggctccaggatccgcgcgccgaccggccctccgcgagcgtgtatccgtactggcaggag
cgggtgcgcggcgagtggctgagggacgtgctcgctgccccggcaggggagggatccacc
gtcgcgcgcgaactggcggcgaggggtctcgagctcaggtgcgagccggggaggtcggtg
ctcgatgggtgcgggctcaccttggcctcggtggcctttcgcaagtccacgagcgacggc
gtcccgctggtcggcctgcacatgaatcgcacgcaggtccggtcgacgtccgccgacttc
ctggtggacccgcgctgggtccggccggcggacaccagggacacctcagagccgttcgag
ggcttcctggtgggggcgtactgcgtcgaggaggagctgctgcttcgcaggaggctgtgc
ttccccgacggcgtggcccgcggggacatcgcggccttcgtcaacacgggcggctacctc
atgcacatcctcgagagcgcgtctcatcagctgccgctcgcggcgaccgtggtgaaacgg
cggcctcaggctgcgtcgggctcgagtccggggtccgagtccgcgtgggtgcgagacggg
attgacgcggtgggggcgaccggtgcggccagtgcgacgggggacgtcccgtggggtccg
atgccgtga
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