Demequina sediminis: GCM25873_14960
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Entry
GCM25873_14960 CDS
T09136
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
dss
Demequina sediminis
Pathway
dss03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCM25873_14960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dss03400
]
GCM25873_14960
Enzymes [BR:
dss01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
GCM25873_14960
DNA repair and recombination proteins [BR:
dss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GCM25873_14960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDZ61705
LinkDB
All DBs
Position
complement(1407262..1407807)
Genome browser
AA seq
181 aa
AA seq
DB search
MARGADAPEVLPDILRPGLRVVLCGTAPGLVSAARGHYYAGPGNRFWSLLWEAGLVTERL
SHEDDARVGEWGIGLTDLVKTLAQSHDRGLPYDVPGLVAKVEEHRPAWVAFTSKEAGAAA
SRWAGRPRPGLGVQDWLLGGARVFVLPSPSGRNQGRASYDGRATRLEWWRELAAVVRDGV
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtggctcgcggcgccgacgctcccgaggtcctcccggacatcctccgtccggggctgcgc
gtggtgttgtgcggcaccgcgccgggactcgtgtccgcggcgcgcggtcactactacgcg
ggaccgggcaaccggttctggtcgttgctgtgggaggcggggctggtgaccgagcgcctg
tcgcatgaggacgatgcgcgggtgggcgagtgggggatcggtctgactgaccttgtcaag
accttggcgcagagccacgaccgggggttgccgtacgacgtccccgggctcgtcgccaag
gtggaggagcatcgtcccgcgtgggtcgccttcacctcgaaggaggccggcgcggcggcc
tcccgctgggcgggacggccgcgcccgggactgggcgtccaggactggctgctcggcggc
gcgcgagtgttcgtgctgccgagccccagcgggcgcaaccagggccgcgcgtcctacgac
gggcgtgcgacccgtctcgagtggtggagagagctcgccgcagtggtccgcgacggcgtt
agctga
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integrated database retrieval system
