Demequina sediminis: GCM25873_17440
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Entry
GCM25873_17440 CDS
T09136
Symbol
groE_1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dss
Demequina sediminis
Pathway
dss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCM25873_17440 (groE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dss03019
]
GCM25873_17440 (groE_1)
03110 Chaperones and folding catalysts [BR:
dss03110
]
GCM25873_17440 (groE_1)
03029 Mitochondrial biogenesis [BR:
dss03029
]
GCM25873_17440 (groE_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dss04147
]
GCM25873_17440 (groE_1)
Enzymes [BR:
dss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GCM25873_17440 (groE_1)
Messenger RNA biogenesis [BR:
dss03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GCM25873_17440 (groE_1)
Chaperones and folding catalysts [BR:
dss03110
]
Heat shock proteins
HSP60 / Chaperonin
GCM25873_17440 (groE_1)
Mitochondrial biogenesis [BR:
dss03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GCM25873_17440 (groE_1)
Exosome [BR:
dss04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GCM25873_17440 (groE_1)
Exosomal proteins of other body fluids (saliva and urine)
GCM25873_17440 (groE_1)
Exosomal proteins of breast cancer cells
GCM25873_17440 (groE_1)
Exosomal proteins of colorectal cancer cells
GCM25873_17440 (groE_1)
Exosomal proteins of bladder cancer cells
GCM25873_17440 (groE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BDZ61953
LinkDB
All DBs
Position
complement(1651137..1652762)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGMERGMNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEEPFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVTQGLRNVAAGANPIALKKGIE
KAVEAVTAELLKAAKEVETKEEIAATAGISAGDPAIGELIAEAMDKVGKEGVITVEESSA
LGLELELTEGMRFDKGFLSAYFVTDPERQEAVLEDAYVLLVESKITSVKDLVPVLEKVMQ
TGKPLAIIAEDVESEALATLVVNKIRGTFKAVAVKAPGFGDRRKAMLQDMAILTGGTVIS
ESVGLSLDNAGLELLGQARKVVVTKDETTIVEGAGAAEQIEGRVRQIRAEIDNSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GTTAFATLELEGDEATGARIVEAAITAPLRQIAINAGLEGGVVVEKVKGLPIGHGLNAAT
GVYEDLLAAGVNDPVKVTRSALQNAASIAALFLTTEAVVADKPEPEPAMPAGGGDMGGMG
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcattgccttcgatgaggaggcccgccgcggtatggagcggggcatgaac
gccctcgctgacgccgtcaaggtcacgctcggacccaagggtcgcaacgtggtgctcgag
aagaagtggggcgccccgaccatcaccaacgacggtgtctccatcgccaaggagatcgag
ctcgaggagcccttcgagaagatcggcgccgagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgccggtgacggcaccaccaccgccaccgtcctcgcccaggcgctcgtgacg
cagggcctgcgcaacgtggccgctggcgccaacccgatcgccctcaagaagggcatcgag
aaggccgtcgaggccgtgaccgccgagctgctcaaggcggccaaggaggtcgagaccaag
gaagagatcgccgcgacggctggcatctccgccggtgaccccgcgatcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggagggtgtcatcaccgtcgaggagtcctcggct
ctgggcctcgagctcgagctgaccgagggcatgcgcttcgacaagggcttcctctcggcg
tacttcgtcaccgacccggagcgccaggaggccgtcctcgaggacgcctacgtgctgctc
gtcgagtcgaagatcacgtccgtcaaggacctggtccccgtgctcgagaaggtcatgcag
accggcaagcccctcgcgatcatcgcggaggacgtcgagtccgaggccctcgcgacgctc
gtggtcaacaagatccgtggcaccttcaaggccgtcgccgtcaaggctcccggcttcggt
gaccgccgcaaggcgatgctgcaggacatggcgatcctcaccggcggtaccgtgatctcc
gagtcggtgggcctgtcactcgacaacgcgggtctcgagctgctgggccaggcgcgcaag
gtggtcgtcacgaaggacgagaccacgatcgtcgagggcgccggtgcggccgagcagatc
gagggtcgtgttcgccagatccgtgccgagatcgacaactcggactcggactacgaccgc
gagaagctccaggagcgcctcgccaagctcgccggcggcgtcgccgtcatcaaggcgggc
gcggccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggccgccgtcgaggagggaatcgtcgccggtggtggcgtggccctcatccaggcg
ggcaccaccgcattcgccaccctcgagctcgagggtgacgaggcgaccggtgcgcgtatc
gtcgaggcggccatcaccgccccgctgcgccagatcgcgatcaacgccggcctcgagggc
ggcgttgtcgtggagaaggtcaagggcctcccgatcggtcacggcctcaacgccgcgacc
ggcgtgtacgaggacctgctggccgcgggcgtcaacgacccggtcaaggtgacccgctcc
gcgctgcagaacgcggcgtcgatcgcggcgctgttcctcacgaccgaggccgtcgtggcc
gacaagcccgagcccgagccggccatgccggccggcggtggcgacatgggcggcatgggc
ttctaa
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