Demequina sediminis: GCM25873_19260
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Entry
GCM25873_19260 CDS
T09136
Name
(GenBank) xylose ABC transporter ATP-binding protein
KO
K10548
putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
Organism
dss
Demequina sediminis
Pathway
dss02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCM25873_19260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dss02000
]
GCM25873_19260
Transporters [BR:
dss02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Multiple sugar transporter
GCM25873_19260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_ATPase
AAA_23
AAA_15
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BDZ62135
LinkDB
All DBs
Position
complement(1825676..1827229)
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AA seq
517 aa
AA seq
DB search
MTKHILEMRKITKAFPGVKALSDVELSVIDGEIHGICGENGAGKSTLMKVLSGVYPYGTY
EGDIVYDGEIQKFHSIPDSESKGIVIIHQELALIPYLSVAENIFLGNERRGKNGMIDWNQ
TNHEAMKLLKQVGLDENPITPVMQLGVGKQQLVEIAKALSKDVRLLILDEPTAALNDDDS
EHLLSLLRTLKSRGITSIMISHKLNEIAEVCDRTTIIRDGHTIETLDIADEPGIQDRIIR
GMVGRDLTSRYPSREHVVGEEVLRVEDWTVYHPTQPGRIVVDKASFNVRKGEVVGIAGVM
GAGRTELAMSLFGRAYGRDITGSIYMHGEEIQVRDVSEAIRHGLAYATEDRKRYGLNLID
DVRRNISAAALFKLSKRGWVDQNKEIKVAEEYRGSMNIKTPTVMQTVGNLSGGNQQKVVL
SKWIYSDAEVLILDEPTRGIDVGAKYEIYTIINRLVAAGKAVIIISSELPELLGTCDRIY
TLAFGVVTGEVPVKDATQEKLMTLMTQEKTKDREVRA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcacatccttgagatgcggaagatcacgaaggccttccccggtgtcaaggcg
ctctccgacgtcgaactcagcgtgatcgatggtgaaatccacggcatctgcggcgagaac
ggcgcaggcaagtcgacgctgatgaaggttctctccggtgtctacccgtacggcacgtac
gagggcgacatcgtctacgacggcgagatccagaagttccactcgatcccagactctgag
tccaagggaatcgtcatcatccaccaggagctcgcgctcatcccctacctgtcggtagcg
gagaacatcttcctcggcaatgagcgccgtgggaagaacgggatgatcgactggaaccag
accaaccacgaggccatgaagctgctcaagcaggtgggcctcgacgagaaccccatcacc
cccgtgatgcagctgggagtgggcaagcagcagctggtcgagatcgcgaaggcgctgtcc
aaggacgtgcgcctgctcatcctcgacgagcccaccgccgcgctgaacgacgacgactcc
gagcacctgctcagcctgctgcgcaccctcaagtcgcgcggtatcacgtcgatcatgatc
tcccacaagctcaacgagatcgcggaggtgtgtgaccgcaccacgatcattcgtgacggc
cacacgatcgagacgctcgacatcgccgacgagccggggatccaggaccgcatcatccgc
ggcatggtgggccgtgacctcacgagccgctacccgtcgcgcgagcacgtggtcggcgag
gaggtgctgcgcgtcgaggactggaccgtataccaccccacccagcccggtcgcatcgtg
gtcgacaaggcatccttcaacgtccgcaagggcgaggtggtcggcatcgccggcgtcatg
ggcgcgggacgcaccgagctcgcgatgagcctcttcggccgcgcgtacggccgcgacatc
accggcagcatctacatgcacggcgaagagatccaggtccgcgacgtgtccgaggcgatc
cgccacggcctcgcctacgcgaccgaggaccgcaagcgctacggcctcaacctcatcgat
gacgtgcgccgcaacatctccgccgccgccctgttcaagctctcgaagcgcggatgggtc
gaccagaacaaggagatcaaggtcgcggaggagtaccgcggctcgatgaacatcaagaca
cccaccgtcatgcagacggtcggcaacctgtccggcggcaaccagcagaaggtggtgctg
tcgaagtggatctactcggacgccgaggtcctgatcctggacgagccgacccgtggcatc
gacgtgggtgccaagtatgagatctacacgatcatcaaccgcctggtcgcggcgggcaag
gcagtcatcatcatctcgtccgagctgcccgagctgctcggcacgtgcgaccgcatttac
accctggcgtttggcgtcgtgaccggcgaggtgcctgtcaaggacgcgacccaggagaag
ctcatgaccctgatgactcaggaaaagaccaaggacagggaggtccgggcatga
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