Demequina sediminis: GCM25873_23670
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Entry
GCM25873_23670 CDS
T09136
Name
(GenBank) transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
dss
Demequina sediminis
Pathway
dss02020
Two-component system
dss02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GCM25873_23670
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM25873_23670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dss03000
]
GCM25873_23670
Transcription factors [BR:
dss03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
GCM25873_23670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
GntR
Crp
MarR_2
HTH_24
HTH_3
wHTH-PRTase_assc
HTH_31
Sigma70_r4
HTH_23
HTH_29
YfeC-like
DHQS_C
TrmB
DUF2497
Motif
Other DBs
NCBI-ProteinID:
BDZ62576
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Position
2234194..2234886
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AA seq
230 aa
AA seq
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MADAAREEQLLRSSPLFGGMDATSARSLIAQMRRRELAKGDTIFHEGDDGHALYVVVKGK
VKLARTARDGRENLLALLGVGDMVGELSVFDPGPRLSRAHAVEETVVFELPKAVLDEWLD
DHLEMSRHLLRALAQRIRRQSLSMADLVFSDVPGRVAKAILDLGHRFGRMERGHVTVRHG
LTQEELAQLVGASRETVNKALADFASRGWIDVHIGAVEVCEPDRLRARSR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcggcccgcgaagagcagctgcttcgctcgtcgccgctgttcggcggcatg
gatgccaccagcgcgcgctcgctgatcgcccagatgcgccgtcgcgagttggccaagggc
gacacgattttccacgagggcgacgacggccacgcgctctacgtcgtcgtcaagggcaag
gtcaagctggcccgcaccgcgcgggacgggcgcgagaacctgctcgcgctgctgggggtg
ggcgacatggtcggggagctctccgtcttcgacccgggcccgcggctgtcgcgcgcccac
gccgtcgaggagaccgtcgtcttcgaactgcccaaggcggtcctcgacgagtggctcgac
gaccacctcgagatgtcgcggcacctcttgcgggcgctcgcgcagcgcatcaggcgtcag
tcgctctccatggccgacctcgtgttctcggacgtccctggccgcgtcgcgaaggcgatc
ctggacctcggccaccgcttcggccgcatggagcgcggtcacgtcacggtgcgccacggg
ctcacgcaggaggagctcgctcagcttgtgggtgcctcgcgagagacggtcaacaaggcg
ctcgcggacttcgcgtcgcgtggatggatcgacgtccacatcggcgcggtggaggtctgc
gagccggaccggctgcgggcgcgctcgcgctag
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