Demequina sediminis: GCM25873_24170
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Entry
GCM25873_24170 CDS
T09136
Name
(GenBank) iron ABC transporter permease
KO
K02063
thiamine transport system permease protein
Organism
dss
Demequina sediminis
Pathway
dss02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCM25873_24170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dss02000
]
GCM25873_24170
Transporters [BR:
dss02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Thiamine transporter
GCM25873_24170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
BDZ62626
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All DBs
Position
complement(2284271..2285911)
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AA seq
546 aa
AA seq
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MSPSAASTRLWWVLAAVPVAFLTLFFLWPVGAVLARGLLEADAGTGSGIAAALEVLTRER
TVRAILTTVGLALAGTAGSLGLGLPAAWALSRFRWRGARTVRALVTVPFVLPTIVVAAAF
SALLSRSGLLGAWGLDQSALAIVAALVFFNVSVVVRIVGGAWESLSPRMADAARTLGAGR
ATAWWRVTMPALRPAITSAAAVVFLFCSTSFALVLILGGSRIRTVETEIYLQVNQFLDLR
AASVLALVQVVFVGLALLVSARVRPRRAATAVERARAPRRAEWVGIAAALTPVFLLLAAP
VYALVERSLRTADGYGLDHYAALFGEPPARSTLPVPVWEAAVNSLVSAVVATAIAGVIGV
LTAHLVAARTRRAGLLEALVMLPLGVSAVVVGLGLLLTLNRNVLGVDLRASWWLVPIAQA
MVALPLMVRALVPAARAIDPGLRAAAATLGASPWRVWLRVDAPLLRSATGASVAFAFAIA
MGEFGATAFVARPDRPTLPTAIGRLLSRPGLENVGMAFAASVLLAAVTAAVMLASERLRT
TVGAEL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccctcggccgcgagcacccgcctgtggtgggtgctcgcggccgtgcccgtcgcg
ttcctgaccctgttcttcctgtggccggtgggggcggtgctcgcgaggggcctgctcgag
gcggacgcgggaaccggttcgggcatcgccgctgcgctcgaggtgctcacccgcgagcgc
accgtacgcgcgatcctcaccaccgtgggcctcgctctcgcgggcacggcgggctcactc
ggcctcggcctgcccgcggcatgggccctgtcccgcttccgctggcggggcgcgcgcacc
gtgcgcgccctggtcacggtgcccttcgtgctgccgaccatcgtggtcgccgccgccttc
tccgccctgctgtcgcgctcgggactgctcggcgcgtggggactcgaccagagcgcgctc
gcgatcgttgccgccctggtcttcttcaacgtttctgtggtcgtgaggatcgtcggcggc
gcgtgggagtccctctccccgcgcatggccgatgccgcgcgcaccctgggcgctggccgc
gccacggcgtggtggagggtgacgatgcccgccttgcgtcccgcgatcacgtccgccgcg
gcggtggtcttcctgttctgctcgacctccttcgcgctggtgctgatcctgggcggcagc
cggatccgcaccgtcgagaccgagatctacctccaggtcaaccagttcctcgacctgcgt
gcggcctcggtgctcgcgctggtccaggtggtgttcgtggggctcgcgctgctggtgagc
gcgcgcgtgcgtccgcgtcgcgcggcgaccgccgtcgagcgcgcgcgggcgccccggcgc
gcggagtgggtgggaatcgccgccgcgctcacgccggtcttcctgctcctcgccgccccg
gtgtacgcgctcgtggagaggtcgctgcggaccgcggacggctacggactcgaccactac
gcggcgctatttggcgagccgcccgcgcggtcgacgctgccggtgccggtgtgggaagcc
gccgtgaactcgctcgtctccgcggtcgtggcgaccgcgatcgccggcgtgatcggggtg
ctgaccgcgcacctggtcgcggcgcgcacgcgccgcgcgggattgctcgaggcgctcgtg
atgctgcccttgggcgtctcggcggtcgtggtcggccttggcctgctgctcacgctgaac
cgcaacgtgctgggcgtcgacctgcgcgcctcgtggtggctggtgcccatcgcgcaggcg
atggtcgcgctgccgctcatggtgcgcgcgctggtgcccgcggcgcgcgcgatcgacccc
ggcctgcgcgccgccgccgccacgctgggcgcgagcccctggcgggtgtggctgcgcgtc
gacgcgccgctgctgcgctcggccaccggggcatcggtcgcgtttgccttcgcgatcgcg
atgggtgagtttggcgccaccgcgtttgtcgcccgccccgaccggcccacgcttccgacc
gcgatcggtcgcctgctgtcacgaccaggactggagaatgtaggaatggcctttgccgca
tcggtcctgttggccgccgtgacggcggcagtcatgctcgcatcggagcgcctgcgcacc
accgtgggagcggagctatga
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