Demequina sediminis: GCM25873_27390
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Entry
GCM25873_27390 CDS
T09136
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dss
Demequina sediminis
Pathway
dss00260
Glycine, serine and threonine metabolism
dss00460
Cyanoamino acid metabolism
dss00630
Glyoxylate and dicarboxylate metabolism
dss00670
One carbon pool by folate
dss00680
Methane metabolism
dss01100
Metabolic pathways
dss01110
Biosynthesis of secondary metabolites
dss01120
Microbial metabolism in diverse environments
dss01200
Carbon metabolism
dss01230
Biosynthesis of amino acids
dss01240
Biosynthesis of cofactors
dss04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GCM25873_27390 (glyA)
09102 Energy metabolism
00680 Methane metabolism
GCM25873_27390 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GCM25873_27390 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GCM25873_27390 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GCM25873_27390 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GCM25873_27390 (glyA)
Enzymes [BR:
dss01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GCM25873_27390 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BDZ62948
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Position
2586076..2587368
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AA seq
430 aa
AA seq
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MTTDSSATAAVMNATLQDFDPEIAQVLDRELGRQRDYLEMIASENFVPRSVLQAQGSVLT
NKYAEGYPGRRYYGGCEEVDVAESIAIDRAKALFGAEYANVQPHSGATANAAVLHALINA
GDKIMGLSLAHGGHLTHGMKLNFSGKLYDVSAYGLDEATHRIEMDKVREQALATRPDVII
AGWSAYPRHLDFAAFREIADEVGAKLWTDMAHFAGLVAAGLHPSPVPHSDVVSSTIHKTL
GGPRSGLIVSRDTALAKKLNSAVFPGQQGGPLMHVIAAKAVALKAAAAPEFKERMERVLE
GARIIADRLTSPDAIEAGVNVVTGGTDVHLVLADLRHSPLDGQQAEDLLHEVGITVNRNA
VPFDPRPPMVTSGVRIGTAALASRGFGAEEFTEVADVIATALKGGADIDALRARVAKLAD
SFPLYEGLAQ
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgactactgactccagcgccaccgcagcggtgatgaacgccacgctgcaggacttcgac
cccgagatcgcccaggtcctcgaccgcgagctgggccgccagcgcgactacctcgagatg
atcgcgtccgagaacttcgtgccgcgctccgtgctgcaggcgcagggctccgtgctcacc
aacaagtacgccgagggctaccccggccgccgctactacggcggctgcgaggaggtcgac
gtcgccgagtcgatcgcgatcgatcgcgccaaggccctctttggcgccgagtacgccaac
gtccagccccactccggcgcgaccgccaacgcggccgtgctacacgctctcatcaacgcg
ggcgacaagatcatgggcctgtcgctcgcgcacggcggtcacctcacgcacggcatgaag
ctcaacttctccggcaagctctacgacgtctccgcctacggactcgacgaggcgacgcac
cgcatcgagatggacaaggtgcgcgagcaggcgctcgcgacccgccccgacgtcatcatc
gccggctggtccgcgtacccccgtcacctcgacttcgccgcgttccgcgagatcgcggac
gaggtgggcgcgaagctgtggaccgacatggcgcacttcgcgggcctcgtggccgcgggc
ctgcacccgagccccgtgccgcactccgacgtggtgtcctcgaccatccacaagacgctc
ggcggcccccgctcgggcctcatcgtgtcgcgcgacaccgctctcgcgaagaagctcaac
tccgcggtgttccccggccagcagggcgggccgctcatgcacgtgatcgccgccaaggcc
gtggcgctcaaggccgccgccgcgccggagttcaaggagcgcatggagcgcgtcctcgag
ggcgcccggatcatcgcggaccgcctcacctctcccgacgcgatcgaggccggcgtcaac
gtggtcaccggcggcacggacgtgcacctggtgctcgcggacttgcgccactcgccgctc
gacggccagcaggcggaggacctcctccacgaggtgggcatcacggtcaaccgcaacgcg
gtaccgttcgacccccgtccccccatggtcacctccggcgtgcgcatcggcaccgcggct
ctcgcctcgcgcgggttcggcgccgaggagttcaccgaggtcgccgacgtcatcgccacc
gcgctcaagggcggcgcagacatcgacgccctgcgcgcccgtgtcgcgaagctcgcggac
tccttcccgctgtacgagggcctcgcgcagtaa
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