KEGG   Demequina sediminis: GCM25873_27390
Entry
GCM25873_27390    CDS       T09136                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
dss  Demequina sediminis
Pathway
dss00260  Glycine, serine and threonine metabolism
dss00460  Cyanoamino acid metabolism
dss00630  Glyoxylate and dicarboxylate metabolism
dss00670  One carbon pool by folate
dss00680  Methane metabolism
dss01100  Metabolic pathways
dss01110  Biosynthesis of secondary metabolites
dss01120  Microbial metabolism in diverse environments
dss01200  Carbon metabolism
dss01230  Biosynthesis of amino acids
dss01240  Biosynthesis of cofactors
dss04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:dss00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    GCM25873_27390 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    GCM25873_27390 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    GCM25873_27390 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    GCM25873_27390 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    GCM25873_27390 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    GCM25873_27390 (glyA)
Enzymes [BR:dss01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     GCM25873_27390 (glyA)
SSDB
Motif
Pfam: SHMT DegT_DnrJ_EryC1 Beta_elim_lyase
Other DBs
NCBI-ProteinID: BDZ62948
LinkDB
Position
2586076..2587368
AA seq 430 aa
MTTDSSATAAVMNATLQDFDPEIAQVLDRELGRQRDYLEMIASENFVPRSVLQAQGSVLT
NKYAEGYPGRRYYGGCEEVDVAESIAIDRAKALFGAEYANVQPHSGATANAAVLHALINA
GDKIMGLSLAHGGHLTHGMKLNFSGKLYDVSAYGLDEATHRIEMDKVREQALATRPDVII
AGWSAYPRHLDFAAFREIADEVGAKLWTDMAHFAGLVAAGLHPSPVPHSDVVSSTIHKTL
GGPRSGLIVSRDTALAKKLNSAVFPGQQGGPLMHVIAAKAVALKAAAAPEFKERMERVLE
GARIIADRLTSPDAIEAGVNVVTGGTDVHLVLADLRHSPLDGQQAEDLLHEVGITVNRNA
VPFDPRPPMVTSGVRIGTAALASRGFGAEEFTEVADVIATALKGGADIDALRARVAKLAD
SFPLYEGLAQ
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgactactgactccagcgccaccgcagcggtgatgaacgccacgctgcaggacttcgac
cccgagatcgcccaggtcctcgaccgcgagctgggccgccagcgcgactacctcgagatg
atcgcgtccgagaacttcgtgccgcgctccgtgctgcaggcgcagggctccgtgctcacc
aacaagtacgccgagggctaccccggccgccgctactacggcggctgcgaggaggtcgac
gtcgccgagtcgatcgcgatcgatcgcgccaaggccctctttggcgccgagtacgccaac
gtccagccccactccggcgcgaccgccaacgcggccgtgctacacgctctcatcaacgcg
ggcgacaagatcatgggcctgtcgctcgcgcacggcggtcacctcacgcacggcatgaag
ctcaacttctccggcaagctctacgacgtctccgcctacggactcgacgaggcgacgcac
cgcatcgagatggacaaggtgcgcgagcaggcgctcgcgacccgccccgacgtcatcatc
gccggctggtccgcgtacccccgtcacctcgacttcgccgcgttccgcgagatcgcggac
gaggtgggcgcgaagctgtggaccgacatggcgcacttcgcgggcctcgtggccgcgggc
ctgcacccgagccccgtgccgcactccgacgtggtgtcctcgaccatccacaagacgctc
ggcggcccccgctcgggcctcatcgtgtcgcgcgacaccgctctcgcgaagaagctcaac
tccgcggtgttccccggccagcagggcgggccgctcatgcacgtgatcgccgccaaggcc
gtggcgctcaaggccgccgccgcgccggagttcaaggagcgcatggagcgcgtcctcgag
ggcgcccggatcatcgcggaccgcctcacctctcccgacgcgatcgaggccggcgtcaac
gtggtcaccggcggcacggacgtgcacctggtgctcgcggacttgcgccactcgccgctc
gacggccagcaggcggaggacctcctccacgaggtgggcatcacggtcaaccgcaacgcg
gtaccgttcgacccccgtccccccatggtcacctccggcgtgcgcatcggcaccgcggct
ctcgcctcgcgcgggttcggcgccgaggagttcaccgaggtcgccgacgtcatcgccacc
gcgctcaagggcggcgcagacatcgacgccctgcgcgcccgtgtcgcgaagctcgcggac
tccttcccgctgtacgagggcctcgcgcagtaa

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