KEGG   Dolosigranulum savutiense: VUQ06_00340
Entry
VUQ06_00340       CDS       T10362                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
dst  Dolosigranulum savutiense
Brite
KEGG Orthology (KO) [BR:dst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dst03016]
    VUQ06_00340 (truB)
Enzymes [BR:dst01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     VUQ06_00340 (truB)
Transfer RNA biogenesis [BR:dst03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VUQ06_00340 (truB)
 Prokaryotic type
    VUQ06_00340 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 LPD26
Other DBs
NCBI-ProteinID: XBC49702
UniProt: A0AB74U2R8
LinkDB
Position
complement(80486..81397)
AA seq 303 aa
MDGLLPLWKEKGMTSHDVVFKLRKLLRIKKIGHAGTLDPDVDGVLPVAIGKGTKVLEFMV
DSDKRYIGEVTLGIATTTEDASGEVVEQVTISPGELDEAAIDQALATFIGQIQQVPPMYS
AVKVKGKRLYEYAREGIEVERPVRQATIHSFKRTSPVAYENQVARFSFEVHCGKGTYVRT
LAVDLGEQLGYPSHMSQLTRTLSAGFQAEAAVTLAEVAELQAASQLDQVIQPLETGLSHL
ETMHLTDQQWSQVQHGAVFRQSEWSVQSYPVVCYYRDQAVAIYEEHPAKTGYIKPKKVLR
TEV
NT seq 912 nt   +upstreamnt  +downstreamnt
gtggacggattattacctttatggaaagaaaaaggcatgaccagtcatgatgttgttttt
aagttgcgcaagttgttgcgtattaaaaaaattggccatgcaggtacattagatcctgat
gtggatggtgtattgccggttgcgatcggaaaaggaacaaaagtattagagtttatggtg
gattctgataaacgctacataggagaagtgacgctaggaatagcgacaacaacagaagat
gcgagcggagaggtcgtagaacaggtaaccatttcgccgggtgaattagatgaagcagca
attgatcaggcgttagctacttttattggacagattcaacaagttcccccgatgtattca
gcagtgaaagtgaaggggaaacgattgtatgaatatgctcgcgaagggattgaagttgag
cgtccagttcgtcaagctacgatacatagcttcaagcgaacttcaccggttgcttatgag
aatcaggtggcgcgcttttcttttgaagtacattgtggtaaggggacgtatgtaagaact
ttagccgtggatttaggtgaacaattagggtatccaagccatatgtctcaattaacgcga
acattaagtgcgggttttcaggcagaagctgcggtaacattggcagaagttgctgaatta
caagcggcttctcagttagatcaagtaatccaaccgttagagacaggtctctctcattta
gaaacaatgcatttaaccgatcaacagtggtctcaagtgcaacatggcgctgtttttaga
cagtcagaatggtccgttcagtcgtatccagtcgtctgttattaccgagatcaagcagta
gcgatttacgaagagcatccggccaaaacaggctatataaaaccgaaaaaagtcttacga
acagaagtgtag

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