Dolosigranulum savutiense: VUQ06_00610
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Entry
VUQ06_00610 CDS
T10362
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dst Dolosigranulum savutiense
Pathway
dst03030
DNA replication
dst03410
Base excision repair
dst03420
Nucleotide excision repair
dst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VUQ06_00610 (polA)
03410 Base excision repair
VUQ06_00610 (polA)
03420 Nucleotide excision repair
VUQ06_00610 (polA)
03440 Homologous recombination
VUQ06_00610 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dst03032
]
VUQ06_00610 (polA)
03400 DNA repair and recombination proteins [BR:
dst03400
]
VUQ06_00610 (polA)
Enzymes [BR:
dst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VUQ06_00610 (polA)
DNA replication proteins [BR:
dst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VUQ06_00610 (polA)
DNA repair and recombination proteins [BR:
dst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VUQ06_00610 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VUQ06_00610 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
XBC49753
UniProt:
A0AB74U033
LinkDB
All DBs
Position
complement(134126..136786)
Genome browser
AA seq
886 aa
AA seq
DB search
MSKKKLLLIDGYSIAFRAFYAMHSQLHRMKNKNGLHTNALYGFHNMLEAVMEKEQPTHAL
VAFDAGKTTFRHELFDDYKGGRESMPAELSEQIPYLKELIAAYGLQTYQLPDYEADDIIG
TLSTQVSDEFEVVIITGDKDLTQLASDQTRVDITKKGITQLKSYTPESMMEEMGIAPEQI
TDLKGLSGDSSDNIPGVTQIGDKTALKLLKKFHTVEELYERIDEMNASKRKEYLIAEKET
ALLSKQLATIITDAPIEISPESLAYSGKNMEALIGFYKEMDFNSHLEKLDTDVYFEELQD
EAEAVEYEWVEEVTEAMFGQSGTLYFEMFEENYHTAPYIIASWTNEKKVYVAEPETLLAS
KAFQDWLEDESARKYAYDAKALMVSLKQRELEIVNITFDLSLASYVLTAENSSGGDVAAI
ANKHGYVDVLEDEAVYGKGKKVSIPDDKTVMYEHVARKVAAIDALAEQLTVELADNDQLA
LFEEIELPLAHVLGEMEIQGITTDANRLEIMKEEFADVLEEIEAKIYAEAGESFNINSPK
QLSDVLFSEDKLNYEPIRKTKTGYSTAQDVLEKMTSYAPIAELILEYRTIAKLQSTYVEG
LLDVIEADGKIHTRYGQTVARTGRLSSVDPNLQNIPVRSEMGRKIRQAFVPREAGWKIFG
ADYSQIELRILAHMSEDEALIETYLNDQDVHTTTAMKVFDLDSPAEVTANQRRDAKAVNF
GIVYGISDYGLSENLGITRKEAREYIDTYFSRFPNVKEYIDQSIREAKDKGYVETLYHRR
RYLPDINSRNFNVRSFAERTAMNTPIQGSAADIIKVAMVEMQKRLKASDLKATMLLQVHD
ELIFEAPESELAELEALVSDVMEHVVELDVPLQVASSSGDNWYEAK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaagaaattgttattaattgatggatatagtattgcgttccgggcgttctat
gcgatgcatagtcagttgcaccggatgaagaataagaatgggctacatacgaatgcgctc
tatgggtttcataatatgttagaagcggtgatggaaaaagaacaaccaacacatgcatta
gtggccttcgatgcggggaagactacttttcggcatgagttatttgatgattataagggc
ggtcgtgagagtatgccggccgaattgtctgagcagataccttatttgaaggaattaatt
gctgcgtatggtctacagacgtatcaattgccggattatgaagcggatgatattatcgga
accttgagcacccaagtatcagatgaattcgaagtcgtcattattacgggggataaggat
ttgacgcaactggccagtgatcagacccgggttgatattacgaagaaggggattacgcag
ttgaagtcgtatacgccggaatcaatgatggaagagatggggattgccccagaacaaatt
accgatttgaagggattatcgggggattcttcggataatattccaggtgtaacacagatt
ggagataagacggcacttaagttgttgaagaagttccatacagtagaagaattgtatgaa
cgcattgatgagatgaatgcctctaagcgcaaggaatatttaatcgctgagaaagaaacg
gcgctacttagcaagcaattggccactattattactgatgcacctattgagatttcaccg
gagtcattagcttattcggggaaaaatatggaggcgttgattggcttctataaggaaatg
gacttcaatagtcatttagaaaagttagatacggatgtgtacttcgaagaattacaagat
gaagcagaagcggttgaatatgaatgggtcgaagaagtaacggaagcaatgttcggacag
agcggaacattgtatttcgaaatgttcgaggagaattaccatacggcaccttatattatt
gcgagctggactaatgagaagaaagtctatgtagctgagccagagacgttgttagcttcc
aaggctttccaagattggctagaagatgagtcagcccggaagtatgcgtacgatgcgaaa
gcattaatggtatccttgaagcaacgtgaattggagattgttaatattacttttgatttg
tcgctggcatcgtatgtattgactgctgagaattctagtggcggtgatgtggcggctatt
gccaacaagcatggatatgtggatgtcttagaagatgaagcggtctacggtaaagggaaa
aaagtaagtattcctgatgataaaacagtcatgtatgagcatgtagctcgtaaagtagct
gcaattgatgccttagcagagcagctaacagtggaattggcggataatgatcagttagcc
ctgttcgaagaaattgaattacctcttgcccatgtcttaggtgagatggagattcaaggt
attacgacagatgcgaatcgtttggagataatgaaggaagaattcgctgacgtattagaa
gagattgaagctaagatttatgcagaagcaggcgaatcattcaatattaattctccgaaa
caattgagtgatgtactgttcagtgaagataagttgaactatgagccgattcgtaagacg
aagacgggttactctactgcgcaagatgtcctggaaaagatgacatcctatgcgcccatt
gctgagctgattctggagtaccggaccattgcgaaactccagtcaacctatgtggaaggc
ttgttggatgtgatcgaagcagatggcaaaattcatacgcgttatggtcaaacggtggct
cggacaggtcgtttaagctcagttgatccgaatctgcaaaatattccggtgcgttctgag
atggggcggaagatccgccaagcgtttgttccaagagaagctggatggaagatcttcgga
gcagattattctcagattgaattgcgtattcttgcccatatgtcggaagatgaagcttta
attgagacgtatctgaatgatcaagatgtccatacgacaactgcgatgaaagtcttcgat
ctagattcaccggcagaagtgacagcaaatcaacgtcgtgatgccaaagcggttaacttc
ggaattgtctacgggattagtgattatggtctatcggagaacttaggtattacgcgaaaa
gaagcgcgcgagtatattgatacgtactttagtcgcttcccgaatgtgaaggaatatatc
gatcaatcaatccgtgaagcgaaggacaaaggttacgtagaaactctgtaccaccgtcgt
cgttatttaccagatattaattcgagaaatttcaatgtgcggtcatttgcggagcgaaca
gcgatgaatacgcctattcaaggaagtgcagctgatattattaaagtggctatggttgag
atgcaaaaacgactgaaagcatcagacctgaaagcgacgatgctcttgcaagttcatgat
gaattaatttttgaagcaccggaatcagaactggctgaattagaagcattagttagtgat
gtcatggaacatgtggttgaactggatgtcccgctacaagttgctagcagttctggcgac
aattggtatgaagcgaagtaa
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