Dolosigranulum savutiense: VUQ06_01435
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Entry
VUQ06_01435 CDS
T10362
Name
(GenBank) glycoside hydrolase family 2 TIM barrel-domain containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
dst Dolosigranulum savutiense
Pathway
dst00052
Galactose metabolism
dst00511
Other glycan degradation
dst00600
Sphingolipid metabolism
dst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
VUQ06_01435
09103 Lipid metabolism
00600 Sphingolipid metabolism
VUQ06_01435
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
VUQ06_01435
Enzymes [BR:
dst01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
VUQ06_01435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
F5_F8_type_C
Glyco_hydro_20
Glyco_hydro_2
Big_4
Glyco_hydro_2_N
DUF4982
F5_F8_type_C_2
YSIRK_signal
Glyco_hydro_2_N2
BetaGal_ABD2
Invasin_D3
DUF7490
Cas9_a
Motif
Other DBs
NCBI-ProteinID:
XBC49915
UniProt:
A0AB74U409
LinkDB
All DBs
Position
complement(320357..328237)
Genome browser
AA seq
2626 aa
AA seq
DB search
MFSKNNHQMKNSDCGNKQKKYSLRKLSVGLVSVSLGIVLYTGNAVSVSAEEVNDEVNVDE
GVAEKSPTIENTELAEVSSDANPEEVIDIESAVEKAVETIESGAEGALEKLTEEIEENNQ
LVSEDNDNESSSDEELDTIVETSSNEVKTDESDIENIVDDEIKYQKSTEQKRINSSEARE
QYVQLVGENERKVLFSSNWRVQRGENTEASQANFDDKEWNVIDLPHDYSIDQEFSTQYEA
ESGFLPGGVSWYRKDFVLPNELKNKNVTFHLEGAYMNTEVYVNSHKVGEHHHGYTGAAFD
ITKYLNTDGKTRNVIAVRTENKVPTSRWYSGSGIYRDVNLMVTDKLHVDHYGVKIEANNL
EENHESTVTTTVKTTVINNHEEAKDFTVEVRLLDKDGQQVANVQSNSLKIEVGQSMIENL
GFNVETPTLWSIDNPYLYKVETLIKTNDTVIDRVVNDFGYRFFKFDADEGFSLNGKNIKL
KGVNMHHDQGALGAVANPAAMERQVQILKKMGANAIRTSHNPVSPALIDIANRYGVLVIE
ESFDGWHRAKNGNVNDYSNYFDQAIGEENEIIHGRSDMTWAEYDLKEMIRKSQNAPSVIM
WSLGNEISEGAGGAPQPYINHGKNLVKWAREIDQTRPLTFGDNRGNLEYEKIHEEIIKYG
GVVGFNYRTDAFMKSLKDKHPAWPLMMSETGSAIHSRSWYSTYGRDNQNLHMSAYDTDEA
VVGWGASASESWRRVIENDFIAGEFVWTGFDYLGEPTPWNGIGQGSVSGQGAKPNSSFFG
IVDTAGFPKDTYYLYHSMWNDQEDTLHLMPTWNKENLVVDNQGHVKVDVFTNAAKVELYL
NGEKVAEDTSTLHTTDLGYSYRRFTSTNNKKPYATFNIKHEPGELSVRAWDEEGNEITEN
AYGRKLVETYGKPAALKASGNKEELTADGRDLLYVEVDVVDEEGRLVDNATDRVNFEVVG
EGKLVGVDNGNQADTDSYKGNTRTAFGGKVLAIIQATNRAGSITVNVTGEGLEGTSLTVN
TKAKPSNDVTFLRSYHLADTFYTQAGQPVALPNVISGTFSNAESRDIAIEWDEIDQSQYE
NTGTFEITGRLVDYDTPIKTTVSVLNKITAIENYATALSTTQTLRLPETRRGYNSLGEFV
TVPFAVTWQTDDIDISQPGDYTIKGTADVFGQDYEVEATIRVVEAVSPDNIASANYHNTP
TFKNGYVKDGIPIYTERMIWGNYTTLNDGDYEGNDFWGGYINPTESFLELNWTETYSIQN
LRLWHYADHTNAALPGPENMRFEYLDETDNQWKEIGFSNITQTVHTAGNTPYAFVEPVRT
SRLRIFMKSSKGKAPALTGIEVDEFISAVQKSSSTELETVNINGQDIAVDSFVNNRYFVQ
DTEITEVKATSKDNAAVTIAEDDENSYIIRVVSEDEKQVTEYFIKHGKREETPTEEEDKP
EVGQQLPTVEEDKVTGTNIVEVDKFDWIDTSSEQTTGNTSVEGPLELAFDKNPNTFWHSA
WDKKDSGSYSVYMRLKEADTIRGLRYVPRQDVERNGIATKYILWAKIGPGEDDWVGKRGE
WSLDREEKFAYFDQTLRTDYVVFELLEGYAGYGTAAEMELLRREIKPDLVETETESVIPH
ENSVHPDKIKNISASSEQLPGEPTEGSIHLAFDGKEETFWHTDWNKKDTFYTVDIELTEP
EQLTGFGYVPRQDYESNGLVTKYEIHAKLNGKLTKVSEGNWANNREEKIIAFENPIETDY
VQFKVLAGNAGFGTAAELKLLKTIEQSTEEQPPVEADDRPMINRTHEEKLNAMKGISVDA
GRKYYSVDQLKDIIDVMSTRGYTDLQLMLGNDGLRFVLDDMTITTESKTYDSNKVKEAIK
KGNKKYYDDPNGNVLTQADMQDILDYAKAKGIRIVPGINSPGHMDAMLDAMKLLGIENPN
YSYRGSISDRTIDLNNEEAVEFTKELIKAYATFFSGQTDLFNIGLDEYANDLFKTGGMGW
GHLQSTGQYDKFIEYTNELARIVKSKHMKPVAFNDGIYFNNVTDQGTIDTDIIVSYWTGG
WNGFNTASSKLLADKGHDIINLNDHWYYVIGRENENAGYYNLDQGLQGMNNVPFDLVLKN
EGEPIQTIGSMIAAWADEPRVPFIRDNFVKWLDTFFQNNKNYFRADYSVVHLAIQNIPED
LSKYTDESVQALKDAKEAVDWQKSANDQGDVNEYINAIVNAIEGLVEKPVDESTPTPDPE
GPGTGEDDEEIESGQPTPPIEEEQPKEVIKDYFKLIADFDGEQVVYDRKDSDVWSSAEQA
RKVYDQYLSEVVERDGKEYKRVDVTFTQSDEEAILTYVYRTDDYEPTPEPQPEIYAGDYE
FELTLDGELSTETLTFASRDKALDFVATLNRLYKAAGYQLITQDNGLPGEYKISLSFEKI
VEEEPEITPEDPTIEDEPEVEEPGTETDHEEEEVPEVKEQPTPEPEQPTEPEVTPEELPD
LVEASFIFTSSDGTAHRGSLGEFSSLEQAERRIRHYANELNYTLQNFRLVDGVFLADIEA
DLSEPLPESEQPEEQPIRDVEANFEFTLENGSVHRGSLGEFTSLEQAERRIRHFANKQGY
TLHNFRIENEKFIADVTEVPQAASMSVWTLGVIGVTSIVSVLKNRD
NT seq
7881 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtaagaataatcatcaaatgaaaaatagtgattgtgggaataaacaaaagaaa
tactctctgagaaaattatcagtggggcttgtatcagtatcactgggaattgtattatat
actgggaatgctgtcagcgtatcagcagaagaagtaaatgatgaagtgaatgttgatgaa
ggggtggcagaaaaatcacctaccattgagaacacagaattagcagaagtttcttcagac
gcaaatccagaagaggtcattgacattgaatcagcagttgaaaaagcagtagaaacaatt
gaatctggagcagagggtgctttagaaaaattgacagaagaaattgaagagaataatcaa
ctagtgtctgaagataatgataatgaaagctcgtctgatgaagaacttgatacaattgtt
gagacaagttctaatgaagtgaaaactgatgaatctgatatagagaatatagtagatgat
gagataaaatatcaaaaatcaacagaacaaaaacgaattaatagttcagaggccagagaa
caatatgttcagctagttggagaaaatgagcgtaaagtgctcttctcatccaattggcgt
gttcagcgaggtgaaaatacagaagcgtcccaagctaattttgatgataaggaatggaat
gtcatcgacttgccacatgattatagtatagatcaggaattttcaacacaatatgaagca
gagagtggatttttaccaggtggtgtatcgtggtatcgtaaagactttgtgcttcctaat
gaattgaaaaataaaaatgtaacctttcatttagaaggggcatacatgaatactgaagta
tatgtaaatagtcataaagtaggagaacatcaccacggttatacaggtgctgcttttgat
attacaaagtatttgaatactgatggtaaaactcggaatgttattgcagttcgtactgag
aataaagtacctacatcacgctggtattcaggcagtggaatttatcgtgatgttaactta
atggtgactgataaactacatgtagatcattatggagtaaaaattgaagcaaataattta
gaagaaaatcatgaaagtacagtaactacgactgttaagacgactgttattaataaccat
gaggaagcaaaagactttactgttgaagtgcgactactagataaagatgggcaacaagta
gcaaatgttcagtccaattcattaaaaattgaagtaggacagtcaatgattgaaaatcta
ggattcaatgttgaaactcctacattatggtcaatagataatccatatctatacaaagta
gaaacattaatcaaaacaaatgatacagttattgatcgggtagtaaatgactttgggtac
cgtttttttaaatttgatgcagatgaaggtttctcattaaatggaaaaaatataaaactt
aaaggtgttaatatgcaccacgaccaaggggctttaggtgcagttgctaatccagctgct
atggagcgtcaagtccaaatcttgaaaaagatgggtgctaatgcaattagaacatcacat
aaccctgtatctccagcattaattgatatagctaatcgatatggtgtgctagttatcgaa
gaatcattcgatggttggcatcgggctaaaaatggaaatgtaaatgattactcaaattat
tttgatcaagcaattggtgaagaaaatgagattattcatggacgttctgatatgacttgg
gctgaatatgatttgaaagaaatgatcaggaagagtcaaaatgctccgtccgtaattatg
tggtctcttggtaatgaaatttctgaaggagctggaggagccccacaaccttatatcaat
catggtaaaaatttagtaaaatgggcacgagaaattgaccaaactagaccgctaacgttt
ggggataaccgaggaaatttagaatatgaaaaaattcatgaagaaatcattaaatatggt
ggtgttgtaggatttaactatagaacagatgcatttatgaagagcttaaaagataaacat
ccagcctggcctctgatgatgtcagagaccggtagtgcaattcattcccgctcatggtat
tcaacttatggtagagataatcagaatctacacatgtctgcatacgatacagatgaagct
gttgtaggttggggagcatctgccagtgaatcatggcgtcgagttattgagaatgacttt
attgcaggagaatttgtgtggacaggatttgattatcttggagaaccaacaccttggaat
ggaattggtcaaggaagtgtcagtggacaaggagcaaaaccaaattcctctttctttggt
attgtagatactgcggggttcccgaaagatacgtactacctataccacagtatgtggaat
gatcaagaagataccctacacttgatgccaacgtggaataaagaaaatcttgttgtggat
aatcaaggacacgtgaaggtagatgtctttactaatgcagcaaaagtagaattatattta
aacggagaaaaagtagctgaagatacttctacacttcatacgacagatttaggttattca
taccgacgctttacatcaacgaacaataaaaaaccgtatgcaacatttaatatcaaacat
gaaccaggtgaattatctgttagagcctgggatgaagaaggaaatgaaataactgaaaat
gcctatggacgaaaactcgttgaaacgtatggaaaaccagcagcgttgaaggcttcagga
aataaagaagaattaacagctgatggtagagatctattatatgtagaagtagatgttgtc
gatgaagaggggcgacttgttgataatgctactgatcgtgtgaacttcgaagtagttggt
gaaggtaagttagttggggtagataatggaaatcaagctgatacagattcctacaaagga
aacacacgaacagcttttggtggaaaagtattagcaatcattcaagcaactaatcgagct
ggatcaataacagtaaatgtaactggagagggactggaaggaacatctctaactgttaat
acaaaagctaaaccaagtaatgatgtaacattcttgagaagttatcacttagcagataca
ttctatacccaagctggtcaaccagttgctttgccaaacgtaatatctggaacatttagt
aatgcagaaagcagagatatagctattgagtgggatgagattgatcagagccaatatgaa
aatacaggtacattcgaaattacaggtcgacttgtcgattatgatacaccaataaaaaca
actgtatctgttcttaataagattactgctattgagaattatgctacagctctatcaaca
acacaaacattgcgtcttccagaaacacggcgaggctataattcactaggtgaatttgtg
accgttccatttgcagtgacatggcaaactgatgatattgatatctcacagccgggtgat
tatacgattaaaggaacagcagatgtctttggtcaagattacgaagttgaagcgactatc
cgtgttgttgaagcagtttcacctgataatattgcatcagcaaattaccacaatacacca
acatttaaaaatggttatgtaaaagatggaataccaatctatactgagcgtatgatttgg
ggtaattataccaccttaaatgatggtgattatgaagggaatgatttctggggtggttat
attaatccaactgaatcgttcttggaactgaactggacagaaacatatagcattcaaaat
ttgcgtttatggcattatgctgatcatactaatgcagctcttcctggaccagaaaatatg
cggtttgaatatttagatgaaacagataaccaatggaaagaaattggcttttctaatatt
acgcaaaccgttcatacagctgggaatacaccttatgcttttgtagaaccagtccgaact
agtcgtttgcgaatattcatgaagagttcaaaagggaaagctcccgcgttgactgggatt
gaagttgatgaatttatttcagcagttcaaaagtcttcatcaacagaacttgagacagtt
aacataaatggacaagatattgcagtagattcgtttgttaacaaccgatacttcgttcag
gatacagaaattactgaggtgaaagcaacatctaaagataatgcggctgtaacaatcgct
gaagatgatgagaatagttatattattcgcgtggtgtctgaggatgaaaaacaagtaaca
gagtattttattaagcatggtaagcgtgaagagacaccaactgaggaggaagataaaccg
gaagtagggcaacaattaccaactgtagaagaagataaagtgacaggaactaatattgtc
gaagtagataaatttgactggatagatacatcaagtgaacaaacaactggaaatacttct
gtggaaggaccattagaattagcctttgataaaaatccaaatacattctggcattcagct
tgggataaaaaagattctggaagttactctgtctatatgagattaaaagaagccgacaca
attagaggccttagatatgttccacgtcaagatgttgaaagaaatggtattgctacaaaa
tatatcttatgggcaaaaataggaccaggggaagatgattgggtaggtaaaagaggggaa
tggtctcttgacagagaagaaaaatttgcttactttgatcaaacattacgaaccgattat
gtagtatttgaattattagaaggttacgctggatatggtactgcagcggaaatggaatta
cttcgccgtgaaatcaaaccagatttagttgaaactgagactgaatcagttataccacac
gaaaattcagttcatccagataaaatcaagaatatttcagcctcaagtgaacaattacct
ggagagccaacagaaggatctattcatttagcgtttgatgggaaagaagagacattctgg
cacactgattggaataaaaaagatacgttctacacagttgatattgaattaactgaacct
gaacaacttacaggatttggctatgttccacgccaagattatgaaagtaatggtttagtt
actaagtatgaaattcatgcgaagttaaatggtaaattaacgaaagtgtctgaaggaaat
tgggcaaacaaccgtgaagaaaaaattattgcatttgaaaatccaattgaaacagattat
gtccaattcaaggtacttgcaggaaatgctgggtttggtacagctgctgaactcaagtta
ttaaaaacaattgaacagtcaactgaagaacaaccccctgttgaagcagatgatcgacca
atgataaacagaactcatgaagaaaaactcaatgctatgaaaggaatctctgttgatgca
ggacgcaagtattactcggttgatcaacttaaagatataatcgatgttatgagtacgcgt
ggatacactgacttacagttaatgttagggaatgatgggttacgatttgtgttagatgat
atgaccatcacaacggaatctaaaacatatgatagcaacaaggtaaaagaagctatcaaa
aaaggaaataaaaaatattatgatgatccaaatggtaatgtcttaacacaagctgacatg
caagatatcttagattatgctaaagctaaaggtattagaattgtacctggaattaatagt
ccaggtcatatggacgctatgttggatgccatgaagttattaggaattgaaaatccaaat
tatagctaccgaggatctatatctgatcgtacaattgatctaaataatgaagaagccgtt
gaatttacaaaggaattaataaaagcttatgcaacattctttagtggacagactgattta
ttcaatattggactagatgagtatgcgaatgatctctttaagactggtggtatgggatgg
ggtcacttacaatcaactggtcaatatgataaatttatcgagtataccaatgaattagct
cgaatagttaaaagtaaacacatgaagccagtagcgtttaatgatggtatctactttaac
aacgtaaccgatcaaggtacgattgatactgatattattgtgtcatactggactggcggt
tggaatggctttaacacagcttcatccaaactgcttgcagacaaaggacatgatattatc
aacttgaatgatcattggtattatgttatcggtcgtgaaaatgagaatgcaggttattac
aatttggatcaaggactccaaggtatgaataatgttccatttgatttagtgttgaaaaat
gagggtgaaccaatccaaacgattggaagtatgattgctgcttgggcggacgaaccaaga
gtaccattcataagagataattttgtcaagtggttggatacattcttccaaaataataaa
aattacttccgtgcagattattcagtagtacacctagcaattcagaacattcctgaagat
ctatctaagtacactgatgaaagtgtacaagctttaaaagatgccaaagaagcggttgac
tggcaaaaatctgctaatgaccaaggtgatgtcaatgaatatattaatgcgattgtgaat
gcaattgagggcttagtggaaaaaccagtggatgaatctactccaacaccagatcctgaa
gggcctggaactggggaagatgatgaagagatagagtctggacaaccaactccaccgatt
gaagaggaacaacctaaggaagttattaaagactacttcaaacttatcgctgatttcgat
ggggaacaagttgtctatgaccgcaaagattctgatgtctggtcatcagcggaacaagca
cgcaaggtgtatgatcaatacttatcggaagtcgttgagcgtgacgggaaggaatataaa
cgcgtagatgtcacatttacacagtcagatgaggaagctattttgacttatgtgtaccga
acagatgattatgaaccaactcctgaaccacaaccagagatctacgctggcgattatgaa
tttgaattgacgctggatggtgaattgtcaactgaaacattgacatttgcttcccgggat
aaagcccttgatttcgtcgctacgttaaaccgcttgtacaaagcagcgggataccagttg
attactcaagacaacggcttaccaggtgaatacaaaatcagcttgagcttcgaaaaaatt
gttgaagaagagccagagattacaccagaagatcctacaatagaagatgagccagaagtt
gaggaaccgggtactgagactgaccatgaagaagaggaagtcccagaagttaaagaacag
ccaactcctgagccggaacaaccaactgagccagaggtgacgccagaagaattaccggac
ttagtagaagcaagttttatcttcactagttcagatggaacagctcaccgcggatcatta
ggtgaattcagcagtttagaacaagcggaacgccgtattcgtcactacgcgaacgaactt
aactacaccttgcagaatttccgtctagtagatggtgtgttcttagccgacattgaagcg
gatctaagcgagcctctacctgaatctgaacaaccggaagagcagccaatacgtgatgtt
gaagctaacttcgagtttacacttgaaaatggttctgttcaccgtggctcattaggcgag
ttcactagcttagaacaagccgaacgtcgcatccgtcactttgccaataagcaaggttac
accttgcacaacttccggattgaaaatgaaaagtttatcgctgatgtgaccgaagtacct
caagcagcatctatgagtgtgtggacattaggggtgattggtgtcacgtcgattgtgagt
gtactgaagaatagagattaa
DBGET
integrated database retrieval system
