Dolosigranulum savutiense: VUQ06_03845
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Entry
VUQ06_03845 CDS
T10362
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dst Dolosigranulum savutiense
Brite
KEGG Orthology (KO) [BR:
dst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dst03400
]
VUQ06_03845
DNA repair and recombination proteins [BR:
dst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VUQ06_03845
Archaeal homologous recombinant proteins
VUQ06_03845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
nSTAND_NTPase5
Mis12
nSTAND3
ABC_tran
AAA_21
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XBC50363
UniProt:
A0AB74U4V8
LinkDB
All DBs
Position
complement(812342..815410)
Genome browser
AA seq
1022 aa
AA seq
DB search
MRPLKLELQAFGPFRDKMVIDFSSFDQSGLFLISGPTGSGKTTLFDAMAYALYDEASGDV
RERDTLKSQYANDEMLCYVKFTFDVGGKTYTILRKPTQIGPGVRTKTKHIQTEAELAING
TIVATKKTEVDAYIGQILSLTADQFKQIVMIPQGEFRRLLISGSREKEAIFRNIFKTHQL
EIFQMKLKEKADAFRERRRDLTVKLSQVLTDIQQAIDHPPLQEAAEKQQLTMVRAELQQL
IANGQVEQEVVEEKLAKNQEQQSRYEQILQLRIDQAAQLTKRQQLDDQAEMIAQLKQQLH
NHREASALNQLYQPLQETEQAIRQAEQTLTHYQAEQAKLKEQQAILDQEQVTLQAEMAQL
PTVETEIEQLQAEQRLFKELADIEAEQATLQASLSEQQATLEDTNRAVDQLTHQIENKEA
QLSQINQWRQTLEELQEAQTEYKAKKQQAEQMLETLNQLQQLKQQISAINTTLEQKHAHY
RDLDAQASRMEQAYLSNLAGSLAAELVSGEACPVCGSLEHPDRATTHVDTVTKEQKEAAE
LEATQAREAWVATKTKREHLWETFNATLTEVAIVGDDLDLEITQKRQQVEQLDTTLSSLN
QQIATLRQDIAKEPQWQQDLKDLEHQRQATIETQTRLISSQEHINERLTILTVKAQQLAQ
QLTDESMDALNQKLADKKEWKQQVTDQQQSLNKRQETLATEQASNKKGIDLTKEHLTQLE
TKHYKQEKAYQQALATSELDDTFRQYLVADQTAKGWETTINQAQEQRAITESKLADLQQK
LAQYDAGQATDWYKEQLKRLSQQASELRVSRDQWISQLDSYQRTLTAIINLNQEQQDLRE
NSQIYEELHELASGSKQTNRVSFERYVLSMYFDHIILAANSRLKTMTAGRYVLQRPNTDQ
QKGMAARGLDLNVLDHYTGQNRSVTTLSGGEMFKASLSLALGLSDVIQNELGGVHVDTLF
IDEGFATLDMESLDVAIQILMDLNKTGRLIGIISHVEELKTRIASRINVHKTTQGSQVEV
VV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaggccattgaagttagagttgcaggcgtttgggccatttcgagataagatggtgatt
gacttttcgtctttcgatcagtccggcttattccttatatcaggtccgactggttcgggg
aagacgacgctatttgatgcgatggcttatgcattatatgatgaggcgagcggtgatgtt
cgagagcgtgacacattgaagtcacagtatgccaatgatgagatgctctgctatgtgaag
tttaccttcgatgtgggagggaagacgtatacgattctgcgcaagccaactcagattggt
cctggtgtacgaacgaaaacaaaacatattcaaaccgaggcagaattggccataaatggc
acaattgttgcgacgaaaaaaacagaagtggatgcctatattggacaaattttgagctta
actgctgatcagttcaaacaaattgtaatgattcctcaaggagaatttcggcggttatta
atctcgggtagtcgcgaaaaagaagccatttttcgcaatatctttaagacgcatcagtta
gagatttttcagatgaaactgaaggagaaggcagatgcgtttagagaaagacggcgcgat
ctgaccgtgaaattaagccaagtattgacagatattcaacaagctattgatcatccaccg
ctgcaagaagctgctgagaagcaacaattaacgatggtgcgagctgaattgcagcagttg
atagctaatggacaagttgaacaggaagtggtcgaggagaagctagcgaagaaccaagag
caacaatcccgctatgagcagatcttgcaactacggatagatcaggccgcccaactgacg
aagcgacagcagttggatgaccaagcggagatgattgctcagttaaagcaacagctgcat
aatcaccgcgaagcaagcgcacttaatcaactgtaccaaccacttcaagagacagagcaa
gccatccgccaagcggagcaaacattgacgcattatcaagctgaacaagcaaaacttaag
gaacagcaagctatccttgatcaggaacaagtgaccttgcaagcagagatggcacaactc
cctaccgttgaaacagagattgaacaattgcaagccgaacaacgattatttaaggaatta
gctgatatcgaagcagagcaggcaacactgcaagcctctttgtcagagcagcaagccaca
ctagaagacactaaccgagccgttgaccaactaacgcatcaaatcgaaaacaaagaagcc
caactcagtcaaatcaatcaatggcgccagaccttggaggagttgcaggaagcccaaacg
gagtacaaggcaaagaaacaacaagctgaacaaatgttagagaccttaaatcagcttcag
cagttgaagcaacaaatttctgccattaatacgacgttggaacaaaaacacgctcattat
cgcgatcttgatgcacaagccagtcgcatggaacaagcttatttaagtaatttggcgggc
agcttagcggctgaattggtgtcaggcgaagcgtgcccagtctgtggatcgctcgaacat
cccgatcgtgccactacccatgtggacaccgtgaccaaggaacaaaaagaagcagctgaa
cttgaggccacacaagctcgtgaagcatgggtggcgactaagaccaagcgagagcactta
tgggaaacattcaatgccaccttaacggaggtagcgatcgtgggagatgacttagacctg
gaaataacacagaagcgccagcaagtggaacagctggatacgaccttatcatcgcttaac
caacaaatcgctacattgcgccaagatattgcaaaggaaccgcaatggcaacaagacttg
aaagatttagagcaccagcgtcaagccactatagagacgcagacacgattgatcagcagt
caagagcacataaatgagcgcttgacgatcttgacagtcaaagcccagcaactagcgcaa
caattaacagatgaatcgatggatgctcttaatcagaagctagcagacaaaaaagagtgg
aagcagcaagtgaccgatcagcagcagtctttgaacaagcgccaagagaccctagcaaca
gagcaagctagtaataagaagggaatcgacttaaccaaagaacacctcacccagctggaa
accaagcattataaacaagaaaaagcttatcagcaagctttagctactagcgagctagat
gatacgtttagacagtatttagtcgctgaccagacagctaaagggtgggaaactactatt
aaccaagcccaagagcagcgcgccattactgagagtaaattagctgatctccaacaaaaa
ttagcgcaatatgatgctggccaagcgacagactggtataaggaacagttaaagaggcta
tcgcagcaagcttctgagttgagagtgagtcgggaccaatggattagccaactggacagt
tatcagcgaaccttaacagctattattaatttaaaccaggaacaacaagatcttagagaa
aatagtcagatttacgaagagttgcatgaactggcttccgggagtaaacagaccaatcgt
gtatcattcgagcgttatgtattgagtatgtattttgatcatattatactagctgctaat
agtcgcttgaagacgatgacggctggacgctacgtactgcagcgaccgaatacagatcaa
caaaaaggtatggccgcgcgaggcttagatctaaatgtgcttgatcattatacgggacag
aatcgcagtgtgaccaccttatcaggtggcgagatgttcaaggcatcgctatcacttgca
ttaggactatcggatgttatccagaatgaattaggtggggtacatgtggatacactcttc
atcgatgaaggatttgctacattagatatggaatcactcgatgtcgccattcagattctg
atggacttgaataagacaggacgtttaattgggattatttctcatgtggaggaattgaag
acacgcatcgcttcgcggattaatgtgcataagacaacacaaggcagtcaagtggaagta
gtcgtttaa
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