Dolosigranulum savutiense: VUQ06_04850
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Entry
VUQ06_04850 CDS
T10362
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dst Dolosigranulum savutiense
Pathway
dst03020
RNA polymerase
Brite
Enzymes [BR:
dst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VUQ06_04850 (rpoC)
Transcription machinery [BR:
dst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VUQ06_04850 (rpoC)
DNA repair and recombination proteins [BR:
dst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VUQ06_04850 (rpoC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XBC48872
UniProt:
A0AB74TTI3
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Position
1028093..1031740
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AA seq
1215 aa
AA seq
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MVDVNNFESIQIGLASPDKIRSWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTKDYEC
SCGKYKRVHYKGIVCDRCGVEVTKSSVRRERMGHLELAAPVTHIWYFKGIPSRMGLILDM
SPRSLEEIIYFASYVVTDAGDTPLEEKQLLTEREYRQYRHKYGTDFQADIGAEGVRTLLK
NLDIQAEIDELKELLQTATGQKRSRAIRRLDILDAFNDSNNKPEWMILDVIPIIPPELRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPHIIVQNEKRMLQEAVDALVDNGR
RGRAVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPKLKMYQCGLPKE
MALELFKPFVMRELVEREIANNIKNAKRKVERMDESVWNVLEDVIREHPVLLNRAPTLHR
LGIQAFEPVLVEGKAIQLHPLACEAYNADFDGDQMAVHVPLSDEAQAEARILMLGAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEDDGKLGEGSRFSSVSEAIQAYQTGYVHLHTRVAVQ
TADLPHKPFTDEQRKQYLVTTVGKLIFNEIMPDEFPYLNEPSQVNLEEKTPDKYFLDYGT
DIPKVISEMPLVKPFGKKDLGNIIAQVFKDFQVTETSKMLDRMKNLGYKYSTISGITVGI
ADISALEEKPVILEKAHAKVDKINATHRRGLITEDERYAKVIEVWNQAKDDIQEALKTSL
DRKNNIFMMSDSGARGNISNFTQLAGMRGLMAAPSGEIMELPITSNFREGLSVLEMFIST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREEDCGTKQGLTARAIKVGNEVIEPLI
DRIIGRYARVTVRHPETDEVIVRENEIITEDKGRQIVDAGIEEVTIRSVFSCNTQHGVCK
HCYGRNLATGREVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQEIF
EARHPKGQATITEVSGEVADITEKAEERTKVVTIKGEVDTRSYEIPINARMKVEVGDRIE
RGDPLNEGSIDPKELLAVSDAEKLKNYLLQEVQYAYRSQGVEIGDKHVEVMVRQMLRKVR
VQDPGDTDILPGTMIDLHEFKEQNKKALMSGGQPATARLVLLGITKASLETDSFLSAASF
QETTRVLTDAAIRGKTDNLIGLKENVIIGKNIPAGTGMGIYSNIEPKSVGVVSENVYSIN
DQSEAIDAIEDIEEN
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
ttggtagatgtaaataatttcgaaagtattcaaattggcttagcttcacccgataagatc
cgtagttggtcgcgcggggaagttaaaaaaccggaaacaatcaattaccgtacactaaaa
ccagaaaaagatggactgttttgtgagagaatcttcggtccaactaaagactatgaatgt
tcatgtggaaaatataaacgtgtgcattataaaggtattgtctgtgatcgttgtggagta
gaagttacgaaatctagtgtccgtcgtgaacgtatgggccacttagaacttgctgcacca
gtaacgcatatctggtatttcaaagggattccatcacgtatgggtctgattctagatatg
agtccgcgatcattagaagagattatctatttcgcatcttatgttgttaccgatgcgggt
gatacgccactagaagaaaaacaattattgacagaacgcgaataccgtcagtaccgtcat
aaatacgggacagatttccaagctgatatcggtgcggaaggtgtccgtacattattgaag
aatcttgacattcaagcagagattgatgaattaaaagaacttcttcaaacagcaacggga
caaaaacgttcacgagcgattcgtcgtttggatattttggatgcgttcaacgattcgaat
aataaaccagagtggatgatcttagatgttattccgattatcccaccagaattacgtcca
atggtgcaactagaaggggggcgttttgcaacaagtgacttgaacgacttataccgtcgt
gtcattaaccgaaataatcgtctgaaacgtctcctagacttgaatgcaccgcacattatc
gtccagaacgagaaacgtatgcttcaagaagcagtagatgcattggttgataatggtcgt
cgcggtcgtgctgtgactggaccaggtaaccgtccgttgaaatctctctctcacatgttg
aaagggaagcaaggacgattccgtcagaacttgctcgggaagcgtgtcgactactcaggc
cgttcggttattgttgttggaccgaaattgaagatgtatcaatgtggtctaccgaaagaa
atggcactggagctcttcaaaccattcgttatgcgcgaattagtggagcgcgaaattgct
aataacattaaaaatgcgaagcgcaaagtggagcgtatggatgaatcagtctggaatgta
ctagaagatgtcattcgagaacacccagttcttctaaaccgagcaccgaccttgcaccgt
ctgggtatccaagcattcgagccggtattagttgaagggaaagccattcaattacaccca
cttgcttgtgaggcgtacaatgccgacttcgatggggaccaaatggcggttcacgtgcca
ctaagtgatgaagcacaagctgaagcacgtatcctcatgcttggggcgcagaacatcttg
aatccaaaagatggaaaaccagtcgtgacaccatcgcaagatatggtcttaggaaactat
tacttgacgatggaagatgatggtaaattgggcgaaggatcacgtttttcaagtgtctcc
gaagccattcaagcttaccaaacgggttatgttcacttgcatacgcgagtagctgtccaa
acagctgacttaccacataaaccatttaccgacgagcaacgtaagcaatacctcgtcaca
acggttggaaaattaatcttcaacgaaattatgccagatgaattcccgtacttgaacgaa
ccatctcaagttaacttagaagaaaaaacaccagacaagtatttcttagattacggaaca
gacattccaaaagtaatcagtgaaatgccacttgttaagccatttgggaagaaagactta
ggaaacattatcgcccaagtcttcaaggacttccaagtgactgaaacttctaagatgctt
gacagaatgaagaatctcgggtacaaatattcaactatttcgggaattacagtcggaatt
gcggatatttctgccctagaagaaaaaccggtcatcttagagaaagctcatgccaaagtg
gacaagatcaatgccacacaccgccgtggattgatcacggaagatgagcgttatgcaaaa
gttattgaagtttggaaccaagcgaaagatgatattcaagaagccttgaaaacctcgctg
gaccgtaagaacaatatcttcatgatgagtgattctggtgcccgtggtaatatctccaac
tttacccaacttgcgggtatgcgtggattgatggccgcaccgagtggagaaattatggaa
cttccaatcacatcgaacttccgtgaaggattgtctgtcttagagatgttcatctcgact
cacggtgcccgtaaaggaatgaccgatactgcgctgaaaacagccgactcaggttacttg
acgcgtcgattagttgatgtggcacaagatgtcattattcgagaagaagactgtggaacg
aaacaaggattaactgcccgtgctattaaggtaggtaatgaagtaatcgagccactgatt
gaccgaattattggtcgttatgctcgcgttacagtacgtcatccagaaacagatgaagta
atcgttcgtgagaatgaaattattaccgaagataagggccgtcaaattgttgatgccggt
atcgaagaagtaacaatccgttccgtcttcagttgtaatacgcaacatggtgtctgcaag
cactgttatggacgtaacttagcaactggtcgcgaagttgaagtcggagaagcagttgga
acaattgctgctcagtcaattggtgaaccaggtactcagttaacgatgcgtaccttccac
accgggggagttgccggagatgatattacacaaggtcttccgcgtgtccaagagatcttc
gaagcccgtcatccaaaagggcaagcaacgattactgaagtatccggagaagttgctgat
attactgaaaaagctgaagaacgcacaaaagtagttaccattaaaggagaagttgatacc
cgttcatacgaaatcccaatcaatgcgcgtatgaaagtggaagttggggaccgaatcgaa
cgtggtgacccattgaatgaagggtcgattgatccgaaagaactccttgccgtcagtgat
gctgaaaaattgaagaactatctcttacaagaagtacagtacgcttaccgttcacaagga
gtggagatcggcgataaacacgtcgaggtaatggtacgtcagatgttacgtaaagttcgc
gtacaagatccaggtgatacagatatcttaccaggaacaatgattgacttacatgaattc
aaggaacagaacaaaaaagcccttatgtcaggtggtcaaccagcgaccgcacgcttagtt
ctcctaggaattacaaaagcatcattagagactgacagtttcctatccgctgcttcattc
caagaaacaacacgtgtccttactgatgctgcaatccgtggtaaaacagataacttaatc
ggattgaaagagaacgttattatcggtaagaatatcccggctggaacaggaatgggtatc
tacagcaacatcgaaccaaaatcagttggtgtcgttagcgaaaatgtttatagcatcaat
gatcaaagcgaagcaatcgatgctatagaagatattgaagaaaactaa
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