Dolosigranulum savutiense: VUQ06_08155
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Entry
VUQ06_08155 CDS
T10362
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dst Dolosigranulum savutiense
Pathway
dst03420
Nucleotide excision repair
dst03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VUQ06_08155 (pcrA)
03430 Mismatch repair
VUQ06_08155 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dst03400
]
VUQ06_08155 (pcrA)
Enzymes [BR:
dst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VUQ06_08155 (pcrA)
DNA repair and recombination proteins [BR:
dst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VUQ06_08155 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
VUQ06_08155 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
XBC49447
UniProt:
A0AB74U239
LinkDB
All DBs
Position
1750105..1752321
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AA seq
738 aa
AA seq
DB search
MMSLVLKRDIISGMNPKQKEAVLHTEGPLLIMAGAGSGKTRAVTHRIAYLIQEKGVNPYN
ILAITFTNKAASEMKERVQSLVEDGGSEVWISTFHSLCVRILRREADHIGYQRAFTIADT
SERKTLMKRILKELNLDSKQFSPKAILASISQAKNELIDEKLYAEQASDYWTETVAECYQ
MYQRELRQAEIMDFDDLIMQTVRLFKEHRDVLGHYQTRFQYIHVDEYQDTNHAQYALVQL
LADRLKNICVVGDADQSIYGWRGADMENILNFEKDYPEARTILLDQNYRSTKRILQAAND
VIVNNLNRREKNLWTDNPEGEKITIYSADTEREEARFVASTIKEKMAENSQLSYHDFAVL
YRTNAMSRVVEETFVQSNMPYNIVGGTGYYDRKEIRDLIAYLTLIVNPADMMSFNRIVNE
PKRGIGQATLDKLALAAEEMGWSLYETALNAMHTNLSARASGNLEAFARMIAVLRQLADD
VSITELVEAVLDKTGYIEQLEQERSLEADARIENLKEFYSVTKQFDESDREDKSLLAFLT
DLSLLSPVDEVPIDESEVTLMTMHAAKGLEFSYVFIVGMEESIFPLSRAEDGDELEEERR
LAYVGITRAEQALYLTHARARQLYGQTRRNPKSRFLGEINEAIVESNQLDSSGPTAIKQK
RQSFFSPSKAHQKRRKIHRSSSANTVNWRVGDKVKHQKWQVGTIVKISGEGNNQELDIAF
PGLGIKTLLASFAPIEKV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcttggttctgaaacgtgacattattagcggtatgaatccgaagcaaaaagaa
gccgtcttacatactgaagggccactgctgattatggcaggtgctggatcaggaaaaacg
cgagcggtcacgcaccgaattgcttacttaatccaagaaaaaggggttaatccatataat
attttggcgattacctttacgaataaagcagcatcagagatgaaggaacgggtacaatca
ctcgtggaagatggcgggagcgaggtttggatttcgaccttccactcattatgtgtgcgt
attttacgccgggaagcggatcatatcggttatcaacgggccttcacgattgccgataca
agcgaacgcaaaacattgatgaagcggattttgaaagaattaaacttagatagtaagcag
ttttcgccgaaagcgatcttagccagcattagtcaggcgaagaatgaattgatcgatgag
aagctgtatgcggagcaagcgtctgattattggacagagacggtagccgagtgttaccag
atgtaccaacgcgagctacgtcaggcagaaattatggacttcgatgacttgattatgcaa
acggtacgcttattcaaggaacatagagatgtcttgggtcactatcagacccggtttcag
tatattcatgttgatgaatatcaggatacgaaccatgcgcagtatgcgttagttcagttg
cttgctgatcgcctgaaaaatatttgtgtagtgggtgatgctgaccagagtatttatggt
tggcgtggcgcagatatggaaaatattttaaacttcgaaaaagattatcccgaagcgaga
acaattttgttggatcaaaattatcgctcaaccaaacgaattcttcaagcagccaatgat
gttattgtgaacaacttaaatcgtcgtgagaaaaatctttggacagacaatccagaaggg
gaaaaaattacgatttatagtgcggatactgaacgggaagaagcgcggtttgttgcttca
acgataaaagagaaaatggcggaaaatagccagttgagttatcatgattttgcggtactg
taccgaacaaacgcaatgagtcgtgtggttgaggagacattcgttcaatctaatatgcct
tataatatcgttggtggaacaggttattacgatcgaaaagaaattagagatttaattgct
tatttaactttaattgtgaacccagctgatatgatgagttttaatcggattgtgaatgag
ccgaaacgtggtattgggcaagcaacgctcgataaacttgctttagcagcggaagagatg
ggctggagcctgtatgaaacagcgctgaatgcgatgcataccaatctttccgcgcgagca
agtggtaatttagaagcttttgcgcgaatgattgcggtgttgcgtcaattagccgatgac
gtgtcgatcacagaattagtggaagctgtattggataagacgggctatatcgagcagtta
gaacaagagcgatcactagaggcagacgcccgcattgagaacttaaaagagttctattca
gtgacgaagcaattcgatgaatcagaccgtgaagacaagagtttactcgccttcttaacg
gatttatccttattgagtccagttgatgaagtgccgattgatgagagtgaagtgaccttg
atgacgatgcatgcggcaaaggggctagagttttcgtatgtcttcattgttgggatggaa
gagagtatcttcccattgtcccgggcagaagacggggatgaactagaagaagaacgacgc
ttagcttatgtggggattacgcgagcagaacaggctttgtacttaacgcatgcacgagct
cgtcagctctatggtcaaacaagacgtaatccgaagtcgcgcttcttaggtgagatcaat
gaagctattgttgagagcaatcagcttgattcaagcggtccgactgctattaagcaaaaa
cgtcaaagcttttttagtccgtctaaagctcatcagaagcgtagaaaaatacaccgctca
tcgtcggcgaatacggttaattggcgtgttggcgataaagtgaagcatcagaaatggcaa
gtgggtacgattgtgaagattagtggtgaggggaataaccaagaattagatattgccttc
cctggtctaggcattaagaccttactcgcctcatttgccccgatcgagaaagtataa
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