Dolosigranulum savutiense: VUQ06_08925
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Entry
VUQ06_08925 CDS
T10362
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
dst Dolosigranulum savutiense
Brite
KEGG Orthology (KO) [BR:
dst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dst03400
]
VUQ06_08925 (addA)
Enzymes [BR:
dst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VUQ06_08925 (addA)
DNA repair and recombination proteins [BR:
dst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
VUQ06_08925 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PDDEXK_1
DEAD
DUF2059
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XBC49591
UniProt:
A0AB74TT22
LinkDB
All DBs
Position
complement(1913880..1917659)
Genome browser
AA seq
1259 aa
AA seq
DB search
MSQLVNRSIPLKPENARETDGQWQAIYDTGEDILVSASAGSGKTSVLVKRVIEHVKMGVN
IDELLVVTFTEAAAKEMKDRIARALRKEINQAGTAEDRQLTQASKQHLSRQISNVTQAHI
STLHSFCLQVIRRFYYLIDIDPVFRLLADDTERILLKEDVLEEVLEDWFEAESAHFHTLV
RMYASDRSLDALKSLILELYEFSVANPSPNRWLANLPALYQVDQLVDSPIYQHLIAPKLA
SDIDYLLTLLEQAQAIGVTYQENKSFSKFMKKFEPIQDVLEQMKTHLNTHNLEALEMTVS
EFQFPTKRGGPRKDSDEEMYEALQVVKDIFDQIRDRVTAIHEQFFAVPLAMQLDQMKQLA
PIVQTLTQITLDFSTAYSKRKAEINALDFNDLEQLTLQILATEDTDGNPMATEASQYYRE
FFAEVMIDEYQDINKLQETILTFLAEETPGNRFMVGDVKQSIYGFRQADPSLFLEKYQSY
QAENKQSGTSIILAENFRSNGAVISFVNLIFMQLMDETVGEMTYDESAALVQGMTDFPMS
EEMQPELLIYEQEGEEATSEDAIRTSAEGEFKLIASRIQELIEEEFLIYDKESQTMRPIK
YRDIAILTPTKRHNLLLQETCQAFNIPVALNQTENYFQTTELLLMMSLLKVIDNPRQDIP
LAAVLRSPIVGLDESALAQIRIADKNVSYFDALQQFAELDEQPQAKTCQAFLNQLTAWRD
FARDHPLTELIWRIYDDTGFLNYVGGLPAGSQRKANLHALYERAAVYEASSFKGLFHFIR
FIEKMKAQDKDLAEASHITDEDNAVRVMTIHGSKGLEFPAVFVCNLARRHNISDAQGTYT
LEQSFGFGTDYIDVAQHIRYPTWMNQGLSIRKKNQLLSEQMRVLYVALTRAEQKLFLVGS
YKTKEKAIETWQQARRHEDLILPDYLRTTGQTTFLDWIGYCLIRHRSFNNHELLEAPLDK
SGNHTIEQFAANFDITFKNEQDLLSQPAQEVKHKEQPVELTQVSLHDSTIQQAIDRMMTP
YTHQSSTETTSYQSVSELKRLFEVPEDGQMVKLDISAQKPSINRYVQDELADPSFIQAHK
SQPTASDIGQVTHLLLQSLDLTNEITLETVLAQLTQLADNHQLDATTTKQVPIQSIVQFF
QTDFGQELLQQGDRLQTEKPFSLLMAARDIFEQIDAVDDYVLIHGIVDGYFETEEGIVLY
DYKTDRISYLGEQKAKAELRQKYSGQLNLYKQALEVTLNKPVVRAVIISLDLVEAIDFL
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaattagttaaccgatccattccgctgaaaccggaaaatgcccgggaaacggat
ggacaatggcaagcgatttacgatacaggagaagatatattggtatctgcgagtgcaggt
tcagggaagacttctgtgctcgttaagcgagttattgaacatgtgaagatgggtgtcaat
atcgatgagttacttgttgtaacgtttacagaagcagcagcgaaagagatgaaagatcgt
attgctcgagcgctacgtaaggaaattaatcaagccggcacagcggaagatcgtcaattg
acccaagcaagcaaacaacatttatcgcgtcaaatttcaaacgtaacacaggcgcatatt
tcaaccttgcattcattttgcttgcaagtaatccggcgcttttattacttaattgatatt
gatccagtgtttcgtttgctagcggatgatacagaacggattttgttaaaagaagacgtc
ctggaagaggtgctggaagattggtttgaggcggagtcggcgcattttcatacgttagtg
cggatgtatgcctctgatcgctcactcgatgcactgaagtcgcttattcttgaactgtat
gagttcagtgtagccaatccatcgcctaatagatggttggctaatttaccggcactctat
caagtagatcagttagtagattcgcctatttaccaacaccttattgcacctaaactagcg
agtgatattgattacctactaaccttattagagcaagctcaagcaatcggtgtaacttac
caagaaaataaatcatttagcaaatttatgaaaaaatttgagccgattcaagatgttttg
gaacaaatgaagacacacttgaacactcacaatttagaggcgctggaaatgacagtaagt
gagtttcagtttccgacgaagagaggtggcccacgcaaagattcggacgaagagatgtat
gaagcactacaagtcgtgaaagatattttcgatcaaattcgtgaccgtgtgacagctatt
cacgaacagttcttcgctgtaccacttgccatgcaacttgatcagatgaaacaactcgca
ccgattgtccaaacattaactcaaataacacttgattttagcaccgcttattccaaacga
aaggctgagattaatgctctagactttaacgatcttgaacaattaacgctccaaattctg
gcaacagaggatacggatgggaatcccatggcaactgaggcttcacagtattatcgtgaa
ttttttgcggaagttatgattgatgaatatcaagatattaacaaattacaagaaacgatt
ctaacgtttttagctgaagaaacaccggggaatcgatttatggtaggagatgtgaagcag
tcgatttatgggtttcgtcaggcggatccgtcgttgtttttagaaaaatatcagtcatat
caagcagagaacaagcaatcaggaaccagtattattttagcagaaaatttccggtcgaac
ggcgctgttatttcctttgttaacttgatttttatgcaactgatggatgagacagttggg
gagatgacctatgatgaatcagcggcgcttgttcaaggcatgacagactttccgatgagt
gaggagatgcagcctgaactgttgatttatgaacaagagggtgaagaagcgaccagtgag
gacgctattcgtacgagtgctgaaggggagttcaagctgattgctagtcgtattcaggaa
ctcattgaagaagagtttcttatttatgataaagaatcacagaccatgcgaccgattaaa
taccgagatattgcaattttaacgccaacgaagcgccataatttattgctccaagaaaca
tgtcaggcgttcaatattcctgtagcacttaatcagacagaaaactatttccaaacaact
gaattgctcttaatgatgtcactgctgaaagttattgataatccacgccaggatattcca
ttagccgccgtattgcgctcgccgattgtgggtctagatgagtcggcattagctcaaatt
cggattgcagataaaaatgtatcctacttcgatgcattgcagcaatttgctgagctagat
gaacagccgcaagctaaaacttgccaagcattcttgaatcaattaacggcgtggcgtgat
tttgcaagagatcatccattaactgagcttatttggcgtatttatgacgatacaggcttt
ttaaactatgtaggagggttacctgccggctcacaacgaaaagctaatttacatgcctta
tatgagcgtgctgctgtttatgaagcatccagttttaaagggttatttcactttattcgc
tttattgaaaaaatgaaagcacaagataaagacttggccgaagcgtcacacattaccgat
gaagacaatgctgttcgggtgatgacgattcatgggagcaaaggactcgaatttcccgct
gtgtttgtttgtaatttagcacggcgacataatatttccgatgcacaagggacgtacact
ttagagcaatctttcggatttgggaccgattatatcgatgttgctcagcatataaggtac
ccaacctggatgaatcaagggctcagcattcggaagaaaaaccaattactctctgaacaa
atgcgagtactttatgtggctttaacccgggcggaacaaaaattattcttagtgggtagc
tataaaacaaaagaaaaagccattgaaacttggcagcaagcacgacgacacgaagacttg
attctgcccgattatttacggacaacaggacaaacaactttcttagactggattggctat
tgtttaatccgtcatcgttccttcaataaccacgaactcctagaagcgccacttgataaa
tcaggcaaccacaccatcgaacagtttgcggctaactttgatatcacgttcaaaaatgaa
caggatttacttagccaacctgctcaagaagtgaagcacaaagaacaaccggtcgaacta
acccaggtatcgctgcatgactcaaccatccaacaggcgatcgatcgaatgatgacaccc
tatacgcatcaatcatccactgaaacaaccagttatcaatcggtctcagaattgaagcga
ttattcgaagtgcccgaagatggtcaaatggttaagctagatatctcagcacagaagcca
tcgattaatcgctatgttcaagatgaactagccgatccaagctttatacaagcacataag
tcacaaccgactgcgagcgatatcgggcaggtgacgcatttactgcttcaatcactggac
ttaactaacgagataacgctagagactgtattggcgcagttaacacaattggcagacaat
catcaattagatgccactacgactaaacaagtgccgattcaatcgattgtccaatttttc
cagactgattttggccaggagttattgcaacaaggtgaccgactccagacagaaaaacca
ttctcgctgttgatggctgcccgtgatattttcgaacaaattgatgcagtcgatgattat
gtattgattcacggaattgtggatggctattttgaaacagaagaagggatcgtcctatac
gactacaagactgatcgaatcagctatcttggtgaacaaaaagcaaaagccgaattacga
caaaaatacagcggtcagctaaacttatacaagcaagccctcgaagttaccttgaataaa
cccgttgtaagagctgttataatctcacttgacttggtagaagcaattgacttcctttaa
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integrated database retrieval system
