Dolosigranulum savutiense: VUQ06_09130
Help
Entry
VUQ06_09130 CDS
T10362
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
dst Dolosigranulum savutiense
Brite
KEGG Orthology (KO) [BR:
dst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dst03019
]
VUQ06_09130
03009 Ribosome biogenesis [BR:
dst03009
]
VUQ06_09130
Enzymes [BR:
dst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VUQ06_09130
Messenger RNA biogenesis [BR:
dst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VUQ06_09130
Ribosome biogenesis [BR:
dst03009
]
Prokaryotic type
rRNA helicases
VUQ06_09130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_30
Cas3-like_C_2
DUF3638
P-loop_SecA
AAA_22
SMC_N
AAA_19
Flavi_DEAD
DUF6506
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XBC49630
UniProt:
A0AB74TGR6
LinkDB
All DBs
Position
complement(1967865..1969172)
Genome browser
AA seq
435 aa
AA seq
DB search
MTDYFKQYNFQPFIYEALDAIDFYEPTAIQAKVIPEMTKNRDLVVQSQTGSGKTHAFLLP
LINQIEADKREVQVVITAPSRELAEQLYRMAEQVAGFADPEIVVGRFIGGRDKEKSLDKL
EHRQPHIAIGTPGRMLDMIQSNALDIHKAPFMVVDEADMTLDMGFLNVVDQIASRIPKES
QLFVFSATIPEKLQPFFRKYMNNPKFIESESQSLLSESVDNWLISTRSKNRIDLIHEVLT
LGQPYLALIFANTKEKVDEIAKQLVARGLNCCVLHGGLSARERRRVMRQIRNLEYQYVVA
TDLASRGIDIDGVSHVVNAEIPRELDFFIHRVGRTGRNNLPGTAITFYHPDESPAIDILE
DKGIEFQPKTIKNGRVVDVKDRRDRQQRKHRQQKTYDPEIAGMVKKAKKKIKPGYKKKIN
EFKKRKARRQRRKKK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacagattattttaaacaatataattttcaaccatttatttatgaagcattggacgca
attgatttttatgaaccgactgcaattcaggcaaaagttattcctgaaatgacaaaaaac
cgtgacttagttgtgcaatcacagaccggttcaggcaagacacatgcgttcttgctacca
ttaatcaatcaaattgaggcagacaagagagaagtacaagttgtcattactgcacctagt
cgtgaactagctgaacagctctaccggatggcagaacaagttgctggctttgctgatccg
gaaattgttgtcggacgctttatcggtggacgggataaggagaaatcattagataagtta
gagcaccgccaaccgcatattgcaattggaacgcctggtcggatgttagatatgatccaa
tccaatgcactagacattcataaagctccttttatggtggtagatgaagcagatatgaca
ttggatatgggctttttaaatgtggttgaccaaattgcgagccgcattcctaaagagagt
caactgtttgtattttctgcaaccatcccagagaaattgcaaccatttttccgcaaatat
atgaataatccgaaatttattgaatcagagagtcaatccttattatcagagtccgttgat
aattggctaatttcaacacgtagtaagaaccggatcgatttaattcacgaagtattaaca
ttagggcaaccttacttagcgttgatttttgcgaatacgaaggaaaaagttgatgagatt
gccaagcaattggtagcacgtggattgaattgttgcgtgctgcatgggggattgagcgca
cgtgagcgtcgccgtgtcatgcgccaaattagaaacttagagtatcaatatgtcgtcgcg
actgatttagcatcgcgcggtattgatatcgacggcgtatcccatgtggtcaatgcggaa
attccccgtgagttagatttcttcattcaccgagtgggacgaaccggacgcaacaattta
ccgggcacagcgattaccttctaccatccagatgaatcaccagccatcgatatactagaa
gataaaggcattgaattccaacccaaaacgattaaaaatggtcgtgtagtggatgtgaaa
gatcgtcgtgatcgtcaacagcgtaaacatagacaacagaaaacatatgatccagaaatt
gccggcatggtgaaaaaagcgaagaaaaaaattaagccaggctataagaaaaaaatcaat
gaatttaaaaaacgaaaagcacgtcgacagcgaagaaagaaaaaataa
DBGET
integrated database retrieval system
