Azospira oryzae: Dsui_0365
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Entry
Dsui_0365 CDS
T01657
Name
(GenBank) DNA-directed RNA polymerase, beta'' subunit, predominant form
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dsu
Azospira oryzae
Pathway
dsu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dsu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dsui_0365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsu03021
]
Dsui_0365
03400 DNA repair and recombination proteins [BR:
dsu03400
]
Dsui_0365
Enzymes [BR:
dsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dsui_0365
Transcription machinery [BR:
dsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dsui_0365
DNA repair and recombination proteins [BR:
dsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dsui_0365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AEV24783
UniProt:
G8QNY4
LinkDB
All DBs
Position
complement(360311..364519)
Genome browser
AA seq
1402 aa
AA seq
DB search
MKALLDLFKQVTQEEEFDAITISLASPDKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPTAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIEPGMTSLNRGQLLTEDDYLAKVEEYGDDFIALM
GAEAVRELLRTLDLDHEVERLRSELETTGSEAKNKKIAKRLKILEGFQKSGIKPDWMILE
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
ESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQ
LKLHQCGLPKLMALELFKPFIFHKLELMGLATTIKQAKKMVESQEPVVWDILEDVIREHP
VMLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLSPANGEPIIVPSQDIVLGLYYATRDRINAKGEGMNFADVSEVLRAVNSG
LADLHAKVSVRLKEYVRGESGEWVEKITRYNTTCGRAILSEILPKGLPFSVIDKALKKKE
ISKLINTSFRRCGLKETVVFADKLMQNGYALATRAGISFCSDDMRVPTEKHTIIAEAEKE
VKEIETQYTNGLVTFGERYNKVVDIWGRTGDQVAKVMMEQLGHEEVVDRHGKTVKQESFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITTNFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVTQDLVVTEDDCGTQNGVTMKALIEGGEVIEPLRDRIL
GRVVVADVVNPESEETVIEAGTLVDEDLCDLIDKLGIDEVKVRTPLTCDTRYGLCAKCYG
RDLGRGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHVGGAASRAAVADRVDTKSNGVVRF
TATMRYVTNVKGEKIVFTRSGEVLVTDDNGRERERHKVPYGAILTADDGQVVKAGAVLAT
WDPHTRPMITEYAGTIKFENVEEGSTVAKQIDDVTGLSTLVVIDPKRGGKAQAKGLRPQV
KLLDENGQEVKMHGTEHAVTITFQVGSIITVADGQQVGVGDVLAKIPQESAKTRDITGGL
PRVAELFEARTPKDVGMLAEYTGTVSFGKDTKGKQRLVITDLDGVAHEYLILKDKHVMVH
DGQVVNKGEVIVDGEPDPHEILKLKGVEALARYITDEVQDVYRLQGVKINDKHIEVIVRQ
MLRRVTITEPGDTRFIKSEQVERADVLDENDRVVAEGKLPASYDYMLLGITKASLSTDSF
ISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHNSRRQQAAGNDQG
LDRVLGGEDVAVEEVPAGNDAV
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcactgctcgatctgtttaagcaggtaacccaggaagaagaattcgacgcgatc
accatcagtctcgcgtcgccggacaagatccggtcctggtcctacggcgaagttaaaaag
ccggaaaccatcaactaccgcaccttcaagccggagcgtgacggcctgttctgcgccaag
atctttggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctcaagcat
cgtggcgtcatctgcgagaagtgcggcgtcgaagtaaccctggccaaggtgcgccgcgag
cgtatgggccacatcgagctggccagcccgaccgcccacatctggttcctcaagtccctg
cccagccgtctcggcatggtgctggacatgaccctgcgcgacatcgagcgggtcctctac
ttcgaagcctacgtggtgatcgagcccggcatgacctccctcaaccggggccagctgctg
accgaagacgactacctggccaaggtggaagagtacggtgacgacttcatcgccctgatg
ggtgccgaggccgtgcgcgaactgctgcgtaccctggacctggatcacgaagtcgagcgt
ctgcgcagcgaactggaaaccaccggttccgaagccaagaacaagaagatcgccaagcgc
ctgaagatcctcgaaggcttccagaagtccggcatcaagcccgactggatgatcctggaa
gtgttgcccgtgctgcccccggacctgcgcccgctggtgcccctggacggcggccgtttc
gccacttccgacctgaacgacctctaccgtcgcgtcattaaccggaacaaccgtctgaag
cgcctgctggagctgaaggcaccggaaatcatcgtgcgcaacgaaaagcgcatgctgcag
gagtccgtggactccctgctggacaacggtcgccgcggcaaggccatgaccggcgccaac
aagcgccccctgaagtccctggccgacatgatcaagggcaagggcggccgcttccgtcag
aacctgctgggcaagcgggtggactactccggtcgttccgtgatcgtggtgggtccccag
ctcaagctgcaccagtgcggcctgcccaagctgatggccctggaactgttcaagcccttc
atcttccacaagctggaactgatgggcctggcaaccaccatcaagcaggccaagaagatg
gtcgaatcccaggagcccgtggtgtgggacatcctggaagacgtcatccgcgaacatccg
gtcatgctgaaccgtgcgccgaccctgcaccgtctgggtatccaggctttcgagccgacc
ctgatcgaaggcaaggccatccagctgcatcccctggtgtgtgccgccttcaacgccgac
tttgacggcgaccagatggctgtccacgtgcccctgtccctggaagcccagatggaagcc
cgcaccctgatgctggcctccaacaacgtgctctccccggccaacggcgaaccgatcatc
gtgccgtcccaggatatcgtgctgggtctgtactacgccacccgcgaccgcatcaacgcc
aagggtgaaggcatgaacttcgctgacgtcagcgaagtgctgcgggcagtgaattccggc
ctggccgacctgcacgccaaggtttccgtgcgtctgaaggaatacgtgcgcggcgaaagc
ggcgagtgggtggagaagatcacccgctacaacaccacctgcggccgtgccatcctttcc
gagatcctgcccaagggcctgcctttcagcgtcatcgacaaggccctgaagaagaaggaa
atctccaagctgatcaacacctccttccgccgttgcggcctgaaggaaacggtggtgttc
gccgacaagctgatgcagaacggctacgctctggctacccgtgccggcatctccttctgc
tccgacgacatgcgtgtgccgaccgaaaagcacaccatcatcgccgaggccgagaaggaa
gttaaggaaatcgaaacccaatacaccaacggtctggtgaccttcggtgagcgctacaac
aaggtcgtggatatctggggccgtaccggcgatcaggtggccaaggtcatgatggagcag
ctgggtcatgaagaggtggtggaccgtcacggcaagaccgtgaagcaggagtccttcaac
tccatctacatgatggccgactccggcgcccggggttccgcggcccagattcgccagctg
gccggtatgcggggcctgatggccaagccggacggctccattatcgaaacgccgattacc
accaacttccgtgaaggcctgaacgtgcttcagtacttcatctccacccacggtgcgcgg
aagggtctggccgatacggcactgaagaccgccaactccggctacctgactcgccgtctg
gtggatgtgacccaggatctggtggtgaccgaggacgattgcggcacccagaacggcgtc
accatgaaggccctgatcgagggcggtgaggtgatcgagccgctgcgcgaccgtattctg
ggccgcgtggtcgtggctgacgtggtgaatccggaaagcgaagaaaccgtcatcgaagcc
ggtaccctggtggacgaggatctgtgcgatctgatcgacaagctgggcatcgatgaagtc
aaggtccgtacccccctgacctgcgacacccgttacggtctgtgcgccaagtgctacggc
cgtgatctgggccgcggctccctggtcaatgtgggtgaggctgtcggcgtcatcgccgcc
cagtccatcggcgaaccgggtacccagctgaccatgcggaccttccacgtcggcggtgcg
gcttcccgtgctgccgtggccgaccgggtcgataccaagtccaacggtgtggtgcgcttc
actgccaccatgcgctatgtgaccaacgtcaagggtgagaagatcgtcttcacccgttcc
ggcgaagtgctggtgaccgacgacaatggccgcgagcgcgaacgtcacaaggtgccctac
ggcgccatcctgaccgccgatgacggtcaggtggtgaaggccggtgccgtgctggcgacc
tgggatccccatacccgtccgatgattaccgagtacgccggtaccatcaagttcgagaac
gtggaagaaggttccaccgtcgccaagcagatcgacgatgtgaccggcctgtccaccctg
gtggtgatcgatcccaagcgcggcggcaaggcccaggccaagggcctgcgtccccaggtc
aagctgctggacgagaacggccaggaagtgaagatgcatggcaccgagcacgccgtgacc
atcaccttccaggtgggctccatcatcaccgtggccgacggccagcaggtgggtgtcggc
gacgtgctggcgaagattccgcaagaatccgccaagacccgcgacattaccggcggtctg
ccccgtgtggcagagctgttcgaagcccgtacgcccaaggatgtgggcatgctggccgag
tacaccggtaccgtttccttcggcaaggacaccaagggcaagcagcgtctggtcatcacc
gatctggacggtgtcgcccacgagtatctgatcctcaaggacaagcacgtcatggtgcac
gacggtcaggtggtgaacaagggcgaagtcattgtggacggcgagcccgatccccatgaa
atcctcaagctcaagggtgtcgaagccctggcccgctacatcaccgatgaagtgcaggat
gtgtaccgtctgcagggcgtgaagatcaacgacaagcacattgaagttatcgtgcgccag
atgctgcgtcgggtcaccatcaccgagccgggcgatacccgcttcatcaagagcgaacag
gtcgaacgcgccgatgtgctggacgagaacgatcgcgtcgttgccgaaggcaagctgccc
gccagctacgattacatgctgctcggtatcaccaaggcctccttgtccaccgactccttc
atctccgcggcttccttccaggaaaccacccgcgtgctgacggaagcggccatcatgggc
aagcgcgacgaactgcgcggcctgaaggaaaacgtcatcgtcggccgcctgattcctgcc
ggtaccggtcttgcctaccacaattcccgtcgtcagcaggctgctggcaacgaccagggc
ctcgaccgggtcctgggcggggaggatgtggctgtcgaggaagtgcctgccggcaacgac
gccgtctga
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integrated database retrieval system
