Azospira oryzae: Dsui_0872
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Entry
Dsui_0872 CDS
T01657
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dsu
Azospira oryzae
Pathway
dsu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dsui_0872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsu03400
]
Dsui_0872
Enzymes [BR:
dsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Dsui_0872
DNA repair and recombination proteins [BR:
dsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Dsui_0872
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF5648
Motif
Other DBs
NCBI-ProteinID:
AEV25278
UniProt:
G8QIB8
LinkDB
All DBs
Position
complement(886271..887056)
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AA seq
261 aa
AA seq
DB search
MLRIISLNLNGIRSAFNKGLAEWLAAQDADIVCLQELKAQAPDLTPEMSNPPGFTGYFHY
AEKKGYSGVGLWCRQQPDRVSEGIGHAGFDAEGRYIRADFGNLSVISVYVPSGSSSPERQ
EAKFQFMDEFAPVLAALQAEGREVVLCGDWNIAHREIDLKNWKGNLKNSGFLPEERAWIG
DLFEHKGWVDVYRRLHPEATGEAYTWWSNRGQARAKNVGWRIDYHIATPGIAATAREAFV
YKEQRFSDHAPLIVDYDFAPA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcatcatctccctcaatctcaacggcatccgctccgccttcaacaagggcctg
gccgaatggctggccgcccaggacgccgacatcgtctgcctgcaggaactgaaggcccag
gccccggacctgaccccggaaatgtccaatccgcccggcttcaccggctatttccactat
gccgaaaaaaagggttacagcggcgtcggcctgtggtgccggcagcagccggaccgggtc
agcgaaggcatcggccatgccggcttcgacgccgaaggccgctacatccgcgccgatttc
ggcaatctctcggtcatttccgtgtatgtgccctccggctccagctcgccggagcggcag
gaagcgaagttccagttcatggacgaattcgcgcccgtgctcgccgcgctccaggccgaa
ggccgggaagtggtgctgtgcggcgactggaacatcgcccaccgggaaatcgacctgaag
aactggaagggcaacctgaagaattccggcttcctgcccgaagagcgggcctggatcggc
gacctgttcgagcacaagggctgggtcgacgtgtaccgccgcctgcatccggaagccacc
ggcgaggcctacacctggtggtccaaccggggccaggcccgggccaagaacgtgggctgg
cgcatcgattaccatattgccacccccggcatcgccgccaccgcccgggaggcctttgtc
tacaaggagcagcgcttctccgaccacgctcccctgatcgtggactacgacttcgccccc
gcctag
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