Azospira oryzae: Dsui_1121
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Entry
Dsui_1121 CDS
T01657
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
dsu
Azospira oryzae
Brite
KEGG Orthology (KO) [BR:
dsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsu03021
]
Dsui_1121
Transcription machinery [BR:
dsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dsui_1121
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
AEV25523
UniProt:
G8QK90
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All DBs
Position
complement(1168165..1169022)
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AA seq
285 aa
AA seq
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MTQALTLSHGLPSAVGNLDAYIQAARRFPMLSEAEEFALARRLREEDDVDAARQLVLSHL
RLVIAIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPSRGVRLVSFAMHWIKAEIHEYIL
KNWRLVKVATTKAQRKLFFNLRSLKASSDTLTPAEVDEIAYKLGVKAEEVVEMETRMGGR
DLALDGSPDDEDDNRVAPIAYLADSAAEPTQVLEAREYDRLQSDGLQQALAGLDERSRRI
VEARWLDEENPATLHDLAAEFGVSAERIRQIEVKALQKMKGLLAA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagctttgaccctgtctcatggcctgccctctgcggtaggcaacctggatgcc
tacatccaggcggctcggcgcttcccgatgctgagcgaggctgaggaattcgccctggcc
cgccgtctccgcgaggaagacgacgtggatgctgcacgtcaattggtgctctcccatctg
cgtctggtcatcgccatcgcccggggttacctgggttacggcctgccccatgcggacctg
atccaggaaggcaacatcggcctgatgaaggcggtgaagcgcttcgaccccagccgcggc
gtgcgtctggtgtctttcgccatgcactggatcaaggctgaaatccacgaatacatcctg
aagaactggcgcctggtcaaagtggccaccaccaaggcccagcgcaagctgttcttcaac
ctgcgcagcctcaaggccagcagcgacaccctgaccccggccgaagtggacgagatcgcc
tacaagctgggggtcaaggccgaggaagtggtggaaatggaaacccgcatgggtggccgc
gacctggccctggacggctcgccggatgacgaggacgacaaccgggtggcacccatcgcc
tacctggccgacagtgccgccgagccgacccaggtgctggaagcccgggaatacgaccgg
ctgcagagcgacggcctgcaacaggccctggccggcctggacgagcgcagccggcgcatc
gtcgaagcccgctggctggacgaggaaaacccggccaccctgcacgacctggcagccgaa
ttcggcgtttccgccgagcgcatccgccagatcgaggtcaaggccctgcagaagatgaag
ggcctgctggcagcctga
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