Azospira oryzae: Dsui_1227
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Entry
Dsui_1227 CDS
T01657
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dsu
Azospira oryzae
Pathway
dsu03420
Nucleotide excision repair
dsu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dsui_1227
03430 Mismatch repair
Dsui_1227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsu03400
]
Dsui_1227
Enzymes [BR:
dsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dsui_1227
DNA repair and recombination proteins [BR:
dsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dsui_1227
MMR (mismatch excision repair)
Other MMR factors
Dsui_1227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AEV25627
UniProt:
G8QLN7
LinkDB
All DBs
Position
1283019..1285226
Genome browser
AA seq
735 aa
AA seq
DB search
MSDLLANLNPEQLQAVTLPPQHALILAGAGSGKTRVLTTRIAWLISTGQMGPHAVLAVTF
TNKAAKEMLARLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSLFQILDSADQLSA
IKRLLKNLNVDDEKFPPRELMHFINAHKDQGLRPAQAEVWDDYTRRRVELWAEYEGQCQR
EGVVDFAELLLRTYELLSRNEPLRRHYQERFRHILVDEFQDTNRLQYAWLKLLAGHDGSA
GAPQGAAVFAVGDDDQSIYAFRGAEVGNMRDFEREFGVQNVIRLEQNYRSHGNILDAANA
LIKNNQGRLGKNLWTDQGAGEPIRVFEGFSDLDEARWIVDEARELIREGISRDQIAFLYR
SNAQSRVLEHELFTKGVAYKVYGGLRFFERQEIKHALAYLRLLANPDDDTAFLRVVNFPT
RGIGARSLENLQEAAHRSNSPLYNAAASLTGKAGAAVGAFIRLIEELRRETENLPLPEVV
EHIIERSGLRQHYLGEKEGQERLENLDELINAAASFIAEEGAMPVPDPATPDAPLPSPLA
SFLAHASLEAGDHQAGDGQEAVQLMTVHAAKGLEFDVVFISGLEQGLFPHENSVMEKSGE
EEERRLMYVAITRARQRLYMSHAQTRMLHGQTRYCVPSAFLDELPQELLLRVNARSTPAY
DNSYSRSPRAAAPVTAYESAAPAGLRVGQNVSHAKFGQGVIVATEGRGADARVQVNFGSA
GMKWLALEFAKLTPL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgcttgccaatctcaatccagaacaactccaggccgtgaccctgccgccc
cagcatgccctgatcctggccggcgccggttcgggcaagacccgggtgctcaccacccgc
atcgcctggctcatttccaccggccagatggggccccacgcggtgctggcggtgaccttc
accaacaaggcggccaaggagatgctggcccgcctctcggccatgctgcccatcaacacc
cggggcatgtggatcggcaccttccacggcctgtgcaaccgcttgctgcgggcccaccac
aaggaggccgggctgccctccctgttccagatcctcgattccgccgaccagctctccgcc
atcaagcgtctcctgaagaacctcaacgtggacgacgagaagttcccgccccgggagctg
atgcacttcatcaacgcccacaaggaccagggcctgcgcccggcccaggccgaggtgtgg
gacgactacacccgccgccgggtggagttgtgggccgagtacgagggccagtgccagcgt
gaaggggtggtggattttgccgaactgctgctgcgcacctacgagctgctgtcgcgcaac
gagcccctgcgtcgccattaccaggagcgcttccgccacatcctggtggacgagttccag
gacaccaaccgtctgcagtacgcctggttgaagctcctggccggtcacgacggcagcgcc
ggcgcgccccagggcgcggcggtgttcgccgtgggcgacgacgaccagtccatctatgcc
ttccgcggcgccgaggtgggcaatatgcgggacttcgagcgggaattcggggtgcagaac
gtcatccgcctggagcagaactaccgttcccacggcaacatcctggatgcggccaacgcc
ctcatcaagaacaaccagggccgcctgggcaagaacctgtggaccgaccagggtgccggc
gagccgatccgggtgttcgagggcttctccgacctggacgaggcccgctggatcgtggac
gaggcccgggaactgatccgggagggcatctcccgggaccagatcgccttcctctaccgc
tccaacgcccagtcccgggtgctggagcacgagctgttcaccaagggcgtggcctacaag
gtgtacggcggcctgcgcttcttcgagcgccaggaaatcaagcacgccctggcctacctg
cgcctcctggccaatccggacgacgacaccgccttcctgcgggtggtgaatttccccacc
cggggcatcggcgcccgcagcctggaaaacctccaggaagcggcccaccgttccaactcg
cccctctacaacgccgccgccagcctcaccggcaaggccggggccgccgtcggcgccttc
atccgcctcatcgaggagctgcggcgggagacggaaaacctgcccctgcccgaagtggtg
gaacacatcatcgaacgtagcggcctgcgccagcactacctgggcgagaaggaaggccag
gagcggctggagaacctggacgaactgatcaacgccgccgccagcttcatcgccgaagag
ggggccatgccggtgcccgatccggccacccccgatgcgcccctgccgtcgcccctggcc
tccttcctcgcccacgccagcctggaggccggcgaccaccaggccggcgacggccaggag
gcggtgcagctgatgacggtgcacgcggccaagggcctggagttcgacgtggtcttcatc
tccggcctggagcagggtctctttccccacgaaaactccgtcatggaaaagtccggcgag
gaggaagagcggcgcctcatgtacgtggccatcacccgggcccgccagcggctctacatg
tcccacgcccagacccgcatgctgcacggccagacccgctactgcgtgccctccgccttc
ctcgacgaactgccccaggaactgctgctgcgggtcaatgcccgcagcaccccggcctac
gacaacagctacagccgcagcccccgggcggcggcaccggtgacggcctacgaaagcgcc
gctcccgccgggctgcgggtggggcagaacgtcagccacgccaagttcggccagggggtc
atcgtcgccaccgagggccggggcgccgatgcccgggtccaggtcaatttcggttctgcc
ggcatgaagtggctggccctggaattcgccaagctgacgccgctctag
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