Azospira oryzae: Dsui_2165
Help
Entry
Dsui_2165 CDS
T01657
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
dsu
Azospira oryzae
Pathway
dsu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dsui_2165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsu03021
]
Dsui_2165
Transcription machinery [BR:
dsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dsui_2165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_23
Sigma70_ECF
HTH_28
GerE
TetR_C_36
HTH_29
HTH_40
HTH_7
TnsD
HTH_24
Phage_terminase
HTH_5
HTH_11
PCI
HTH_10
HTH_Tnp_4
DUF6362
Motif
Other DBs
NCBI-ProteinID:
AEV26531
LinkDB
All DBs
Position
2301233..2301748
Genome browser
AA seq
171 aa
AA seq
DB search
MHVASSTESVDHLYRSHHGWLFGWLRKKTGCRDHAADLTQDTFLKLLALPEMPALREPRA
YLLVTANRLLINLHQRSRVERETLQALVLLLEPDSEPSPEHIVAMRQLLRQVLLMLSEEL
EEKPRRAFLLARLEGLSYADIAAELQVSESSVKQYLAKALAHCHGRLYGHL
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcgcttcttcgaccgaatctgtcgaccatctctaccggtcccatcacggctgg
ctgttcggctggctgagaaagaagacgggctgccgcgaccacgccgccgacctgacccag
gacaccttcctcaagctgctggccctgccggaaatgccagccctgcgggagccccgcgcc
tacctgctggtgacggccaaccgcctgctgatcaacctgcaccagcgctcccgggtggag
cgggaaaccctgcaggccctggtcctgctcctggagccggacagcgagcccagccccgaa
cacatcgtcgccatgcgccagctgctgcgccaggtgctgctcatgctctccgaggaactg
gaggagaagccgcgccgcgccttcctcctggcccggctggaaggcctgtcctacgccgat
atcgccgccgagctgcaggtctccgaaagcagcgtcaaacagtatctggccaaggccctg
gcccattgccacgggaggctctatggccacctgtga
DBGET
integrated database retrieval system
