Azospira oryzae: Dsui_2434
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Entry
Dsui_2434 CDS
T01657
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dsu
Azospira oryzae
Pathway
dsu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dsui_2434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsu03400
]
Dsui_2434
DNA repair and recombination proteins [BR:
dsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dsui_2434
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dsui_2434
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
HEM4
Kinesin
AAA_22
Microtub_bd
DUF724
Motif
Other DBs
NCBI-ProteinID:
AEV26792
UniProt:
G8QMG0
LinkDB
All DBs
Position
2593292..2595364
Genome browser
AA seq
690 aa
AA seq
DB search
MSTSPSSPQTAEVVTFPGSPYRLHQPFPPAGDQPEAIRLLVEGLEDGLSYQTLLGVTGSG
KTYTMANVIARTGRPALILAPNKTLAAQLYAEFREFLPENAVEYFVSYYDYYQPEAYVPS
RDLFIEKDSSINDHIEQMRLSATKSLLERRDVVIVATVSCIYGIGDKDDYHNMILHLRQG
DKAGQRDIIKRLSEMQYERNEVDFQRGTFRVRGDVIDIFPAEHAEHAIRVCLFDDEIETL
QLFDPLTGHLLHKLPRFTIYPSSHYVTPRATVLRAVEGIKEELRKRLEFFHKEQRLVEAQ
RIEQRTRFDLEMLNELGFCKGIENYSRHLSGRKPGEAPPTLLDYLPPDALMFIDESHVAI
GQVGAMYKGDRSRKENLVDYGFRLPSALDNRPLKFEEFERLMRQTIFVSATPSDYEKQHQ
GQVVEQVVRPTGLIDPVVLVRPAMTQVDDLLSEIRKRIAVSERVLVTTLTKRMAEDLTDY
LRENGIKVRYVHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADK
EGFLRSERSLIQTIGRAARHLNGTAILYADRVTDSMRRAMDETERRRAKQMAHNEAHGIT
PKGVSKRIKDIIDGVYDPDAAQKELKAAQQQAVYETMSEKNLAKEIKRLEKQMLESAKNL
EFEKAAAARDELFRLKQQAFGAAVHDRDET
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcccccagcagcccgcaaaccgcggaagtcgtcacctttcccggcagtccc
tatcgcctgcaccagccgttccctcccgcgggggatcagccggaggccatccgcctgctg
gtggagggcctggaagacggtctgtcctatcagaccctgctcggcgtgaccggctccggc
aagacttacaccatggccaacgtcattgcccgcaccggccggccggccctcatcctggcg
cccaacaagaccctggcggcccagctctacgccgagttccgggaattcctgccggagaac
gcggtggagtatttcgtctcctactacgattactaccagcccgaggcctacgtgccctcc
cgggacctgttcatcgagaaggattcgtccatcaacgaccacatcgagcagatgcggctg
tcagccaccaaaagcctgctggagcggcgtgatgtggtgatcgtggccaccgtctcctgc
atctacggtatcggcgacaaggacgactatcacaacatgatcctgcacctgcgccagggc
gacaaagccggccagcgggacatcatcaagcgcctctcggaaatgcagtacgagcgcaac
gaggtggatttccagcgcggcaccttccgtgtccgcggcgacgtcatcgacatcttcccc
gcggagcacgcggaacacgccatccgggtctgccttttcgacgacgagatcgagaccctg
caactgttcgatcccctgaccggccacctgctgcacaagctgccccgtttcaccatctat
ccctccagtcattacgtcacaccccgggccacggtgctgcgggccgtggagggcatcaag
gaggagttgcgcaagcggctggagttcttccacaaggaacagcggctggtggaagcccag
cgcattgagcagcgcacccgcttcgatctggagatgctcaacgaactgggcttttgcaaa
ggcatcgaaaactactcgcgccacctgtccggacgcaagccaggcgaagcaccgccaacc
ctgctggattacctgccgcccgacgccctgatgttcatcgacgaatcccacgtggccatc
ggccaggtgggcgccatgtacaagggtgaccgttcgcgtaaggaaaacctggtggattac
ggtttccgccttccgtcggccctggacaaccgccccctcaagttcgaggaattcgagcgc
ctgatgcgccagaccatcttcgtttcggccacgccttctgattatgaaaagcagcaccag
ggccaggtggtggagcaggtggtgcgccccactggcctgatcgacccggtggtgctggtg
cgtccggccatgacccaggtggacgacctgctctccgaaatccgcaagcgcatcgccgtt
tccgagcgggtgctggtaaccaccctgaccaaacgcatggccgaggacctgaccgattac
ttaagggaaaacggcatcaaggtgcgctatgtgcactcggatatcgacaccgtggagcgg
gtggagatcatccgcgacctgcgcctgggggaattcgacgtgctggtgggcatcaacctg
ctgcgggaaggtttggacatccccgaggtatccctggtggccattctcgatgcggacaag
gagggcttcctgcgttcggagcgttccctgatccagaccatcggccgggccgcccgtcac
ctcaacgggacagccattctctatgccgaccgggtgacggactccatgcggcgtgccatg
gacgagaccgagcggcgccgggccaagcagatggcccataacgaggcccacggcatcacg
cccaagggggtctccaagcgcatcaaggacatcatcgacggcgtctacgaccccgacgcg
gcgcagaaggaactgaaggctgcccagcaacaggcggtttatgaaacaatgtccgaaaag
aatctggccaaggaaatcaagcggctggaaaaacagatgctcgagtcagccaagaacctg
gagttcgaaaaggcagcggcggcccgggatgaattgttccgcctcaagcagcaggccttc
ggggcggcagtgcatgacagggatgagacatga
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