Azospira oryzae: Dsui_3092
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Entry
Dsui_3092 CDS
T01657
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dsu
Azospira oryzae
Pathway
dsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dsui_3092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsu03019
]
Dsui_3092
03400 DNA repair and recombination proteins [BR:
dsu03400
]
Dsui_3092
Enzymes [BR:
dsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dsui_3092
Messenger RNA biogenesis [BR:
dsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dsui_3092
DNA repair and recombination proteins [BR:
dsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dsui_3092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AEV27426
UniProt:
G8QI23
LinkDB
All DBs
Position
3309868..3311706
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AA seq
612 aa
AA seq
DB search
METNTHTAALEILHRVFGYTAFRGSQGDIVGHVADGGDALVLMPTGGGKSLCYQIPALLR
HGCGVVISPLIALMQDQVDALTQLGVKAAYLNSTLDWQQVQEVERRVLCGDLDLLYVAPE
RLLTDRCLSLLDKLEEDKRLALFAIDEAHCVSQWGHDFRPEYLQLSALHNRYPDVPRIAL
TATADTATREEMRVRLGLTEARVFVASFDRPNIRYLIVEKDNPRKQLLAFLANHKGEAGI
VYCLSRKKVEETAAWLTSQGIPALPYHAGLPAEVRADNQRTFLREEGITMVATIAFGMGI
DKPDVRFVAHLDLPKSLEAYYQETGRAGRDGEPAEAWMAYGLQDVVLQRSRIEDSVAPEE
QKRLEAQKLNALLAYAESPRCRRVVLLDYFGEASEPCNNCDVCLTPPELWDGTVAAQKAL
SVVYRTGQRFGVVHLIDVLRGKVSDKVKQWGHDALPTFGVGADLDDGAWRAVFRQLVAGG
MLTADLAEHGAMKLTDAARPVLRGEQTLQMRRHVARKGGSGGGSKSRSERAPTKLDDMTL
EDQSLFEDLRQWRAATAKEQGVPAYVILHDKTLKELAEERPTTRDQLMNISGMGTAKLER
YGDDLLGIIRAA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaacacccacaccgccgccctggaaatcctgcaccgggttttcggctacacc
gccttccgcggcagccagggcgacatcgtcggccacgtggccgacggcggcgacgccctg
gtgctgatgcccaccggcggcggcaaatccctctgctaccagattcccgccctgctgcgc
cacggctgcggcgtggtcatctcgcccctgatcgccctgatgcaggaccaggtggacgcc
ctcacccagctcggcgtcaaggcagcctacctcaattcgaccctggactggcagcaggta
caggaagtggaacggcgcgtcctctgcggcgacctggacctgctctacgtggccccggaa
cgcctgctcaccgaccgctgcctgtcgctcctggacaagctggaagaggacaagcgcctg
gccctcttcgccatcgacgaagcccactgtgtctcccagtggggccacgacttccgcccc
gaatacctgcagctctcggccctgcacaaccgctacccggatgtgccccgcatcgccctc
accgccaccgccgacacggccacccgggaggaaatgcgggtgcgcctggggctgaccgaa
gcccgggtcttcgtcgccagcttcgaccggcccaacatccgctacctcatcgtcgagaag
gataatcctcgcaagcaactgctcgccttcctcgccaaccacaagggcgaggccggcatc
gtctactgcctgtcgcgcaagaaggtggaagagaccgccgcctggctcaccagccagggc
attcccgccctgccataccacgccggcctgccagccgaggtgcgggccgacaaccagcgc
accttcctgcgggaagaaggcatcaccatggtggccaccattgccttcggcatgggcatc
gacaagcccgacgtgcgcttcgtcgcccacctggacctgcccaagagcctggaagcctac
taccaggaaacgggccgggccggccgcgacggcgaacccgccgaagcctggatggcctac
ggtttgcaggacgtggtgctgcaacgctcccgcatcgaggattccgtcgcgccggaagaa
cagaaacgcctggaagcccagaaactcaacgccctcctggcctacgccgaatccccccgc
tgccgccgggtggtgctgctcgactacttcggcgaagccagcgagccatgcaacaactgc
gacgtctgcctcaccccgccggaactgtgggacggcaccgtggccgcccagaaagccctc
tccgtggtctatcgcaccggccagcgcttcggcgtggtgcacctcatcgacgtgctgcgg
ggcaaggtcagcgacaaggtcaagcagtggggccacgatgccctgcctaccttcggcgtc
ggcgccgacctggacgacggagcctggcgcgccgtattccgccagctggtggccggcggc
atgctcaccgccgacctggccgaacacggcgccatgaagctcactgatgctgcccgcccg
gtgctgagaggcgaacagaccctgcagatgcgccgccacgtggcgcgcaagggtggcagc
ggcggcggcagcaagagccgcagcgagcgggcgccgaccaagctggacgacatgaccctg
gaagaccagtccctgttcgaagacctgcgccagtggcgcgccgccaccgccaaagaacag
ggcgtgccggcctacgtcatcctgcacgacaagaccttgaaggaactggcggaagaacgg
cccaccacccgggaccagctgatgaacatctccggcatgggcaccgccaagctggaacgt
tacggcgacgatttgctgggcatcatccgggcagcctga
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