Azospira oryzae: Dsui_3214
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Entry
Dsui_3214 CDS
T01657
Name
(GenBank) ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
dsu
Azospira oryzae
Brite
KEGG Orthology (KO) [BR:
dsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsu03400
]
Dsui_3214
Enzymes [BR:
dsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dsui_3214
DNA repair and recombination proteins [BR:
dsu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Dsui_3214
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEV27546
UniProt:
G8QIT6
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All DBs
Position
complement(3449262..3452603)
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AA seq
1113 aa
AA seq
DB search
MTDPRQLVLDALDPRRSVVVEACAGSGKTWLLASRIVRLLLEGAAPGDILAITFTRKAAR
EIEERVMGWLRDLAAMPDAEATVFLAERGMTADAGLLRRARGLYERVADAQPPLSVHTFH
GWFLQLIAAAPLVSGLAGSSLVESTGRLLEELWQNFAAELQADPEGELAGHFTALLQGAG
LDSTRSLLMRLVGRRAEWLAYTGGTENGVAHALEQLQALLGVGEAGEGLKAFFAPGWEAD
YHAYLGFLEQSETKTDQALVAPLRAALQPGAAPEAAFAALGSVLLTQTGTLRSRKPSGAL
DKRFGSDGAARFLDLHQRLGQSLLATREVLRAEQILEFNRHGLSLGAAFLERLEKHKQAR
RLIDFVDAEWQVLQLLQDEGHAAFLQARLDARYKHILLDEFQDTNPLQWQILLAWLDAYT
HGDGGEAPCLFLVGDPKQSIYRFRQAEPRLFATAADFLEHNFGARRLAQDATRRNARSVV
EVVNALFSVEPAFTGFRPQSSLAGQLPGRVELLPLVSLAEEEEQSAGAALRDPLTTPATE
ATDPRRDEEAARLAARLQQFMATLRVKEGEGERPARWGDVMLLVRKRTQLAAYERALKAA
GIPYLAASRGGLLQTLEARDIAALFEFLVLPSADLALAQVLRTPLFAVGDDDLLQLAAAG
PGPWWERLMGLCNRGEARPRLARAFALLDGWLKAADVLPAHDLLDRVFHQGELLARYREA
VPAALWPGVEANLLALLQLALDLDGGRYPSLPRFIDELSRLRDADADEAPDEGIVEGDSN
DGQGRVRILTIHAAKGLEAPIVWLLDANAEGGGPADAWSLLVDWPPQAPRPEHLSLYGIK
ADRGAAREPLFEGEAKLAEREELNLLYVAITRAKQVFVASGSAPKKGDSPENSPYQRLAR
ALVAQGATADEAGTLAYGDLALDAMAGSQAGSQSLPGLPEQWRPAPFLAVEPVGERRLGP
GEDALFGILLHGCLERLTAGLALEPDWWRKVGGATASEAGGEEAEAAARRLMARPELAFL
LDPSLVARNEAEISNAEGQVKRVDRLVETPEAVWVVDYKSSRADTKRLAEYRRQVAEYRE
LLTPLYGQKPVRAALVFGDGTLLEVQEMLSDLG
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccccgccaactggtgctggacgccctggacccccgccgctcggtggtggtg
gaggcctgcgccggcagcggcaagacctggctgctggcttcccgcatcgtgcgtctgctg
ctggagggcgccgcccccggcgacatcctggccatcaccttcacccgcaaggcggcccgg
gaaatcgaggaacgggtcatgggctggctgcgggacctggcggccatgcccgatgccgag
gccactgttttccttgccgagcgcggcatgacggcggacgccggcctgctgcgccgggcc
cggggcctctacgagcgggtggcggacgcccagccgcccctttccgtgcataccttccac
ggctggttcctccagctcatcgccgccgcgcccctggtctccggcctggccggcagcagc
ctggtggaatccaccgggcgcctgctggaagagctgtggcagaacttcgccgccgaactg
caggccgatccggaaggcgaactggccggccacttcaccgccctgctgcagggcgccggc
ctggacagcacccgcagcctgctgatgcgcctggtgggccgccgcgccgaatggctggcc
tatacgggaggcaccgaaaacggcgtcgcccatgccctggagcaattgcaggcgctactc
ggcgtcggcgaagcaggggaggggctgaaggccttttttgccccgggctgggaagcggat
taccacgcctacctgggctttctcgaacagagcgagaccaagaccgaccaggccctggtg
gcgcccctgcgcgccgccctgcagccgggcgcggcgccggaagcggccttcgcggccctg
ggcagtgtgttgctgacccagaccggcaccctgcgctcgcgcaagccctccggcgccctc
gacaagcgcttcggcagcgacggcgctgcccgcttcctcgacctgcaccagcgtctcggt
cagtctctcctggccacccgggaagtgctgcgggccgaacagattctcgagttcaaccgc
cacggcctcagcctgggggccgccttcctcgagcgcctggaaaagcacaagcaggcccgc
cgcctgatcgacttcgtagacgcggaatggcaggtgctgcaactgctgcaggacgagggc
cacgccgccttcctgcaggcccgcctggacgcccgctacaagcacatcctgctggacgag
ttccaggacaccaaccccctgcaatggcagattctcctggcctggctcgacgcctacacc
catggcgacggtggcgaggcgccctgcctgttcctggtgggggaccccaagcagtccatc
taccgtttccgccaggccgagccccggcttttcgccacggcggcagatttcctcgaacac
aacttcggcgcccgccgcctggcccaggacgccacccggcgcaacgcccggtcggtggtg
gaggtggtcaatgccctcttcagtgtcgagcccgccttcaccggctttcgcccccagagt
tccctggccgggcagttgccgggccgggtggagctgctgcccctggtgagcctggcggaa
gaggaggagcaaagcgccggcgccgccctgcgcgatcccctcaccaccccggcgacggaa
gccacggacccgcggcgggacgaggaggcggcccgcctggcagcccgcctgcagcagttc
atggccacgctgcgggtcaaggaaggggagggcgaacgcccggcccgctggggcgacgtc
atgctgctggtgcgcaagcgcacccagctggccgcctacgagcgggccctcaaggccgcc
ggcatcccctatctggcggcctcccggggcggcctgctgcagaccctggaagcccgggac
atcgccgccctgttcgaattcctggtgctgccctccgccgacctggccctggcccaggtg
ctgcgcacgcccctcttcgccgtgggcgacgacgacctgctgcaactggccgccgccggc
cccggcccctggtgggaacgcctcatgggcctgtgcaaccggggcgaagcgcggccgcgc
ctggcccgggccttcgccctgctggacggctggctgaaggcagccgacgtgctgccggcc
cacgacctgctggaccgggtctttcaccagggcgagctgctggcccgctaccgggaagcc
gtgccggcggccctctggcccggggtggaggccaatctgctggccctgctgcaactggcc
ctggacctggacggcggccgctaccccagcctgccccgcttcatcgacgagctgtcccgc
ctgcgcgatgcggatgccgacgaggcgccggacgagggcatcgtcgaaggtgacagcaac
gacggccagggccgggtgcgcatcctcaccatccacgccgccaagggcctggaagcgccc
atcgtctggctgctcgacgccaacgccgagggcggcggtcccgccgacgcctggagcctg
ctggtggactggccgccgcaagcgccccggcccgagcacctttccctctacggcatcaag
gccgaccggggggcggcccgggagcccctgttcgagggggaggcgaagctggcggagcgg
gaggaactgaacctgctctacgtcgctatcacccgggccaagcaggtgttcgtcgcaagc
ggcagcgcgccgaagaagggcgactctcccgagaacagtccctaccagcgcctggcccgg
gccctggtggcccagggggcgacggcggacgaggccggcaccctggcctacggcgatctt
gctctggatgccatggccgggagccaggcgggaagccagtctttgccgggtctgcctgaa
caatggcgtcctgcgccgttcctggcggtggaacccgtgggcgagcggcgcctggggccg
ggggaggacgccctcttcggcatcctcctccacggctgcctcgagcgccttaccgccggc
cttgccctggagccggactggtggcgcaaggtgggcggcgccacggccagcgaagccggc
ggcgaggaagccgaggccgccgcccggcgcctgatggcccggcccgagctggccttcctg
ctcgacccgtccctggtggcccgcaacgaggccgagatcagcaacgccgaaggccaggtg
aagcgggtcgatcgtctggtggaaacgccggaggcggtgtgggtggtggattacaagagt
tcccgcgccgacaccaagcgcctggccgagtaccgccgccaggtggcggagtaccgggaa
ctgctgacccccctctatgggcagaagcccgtacgcgccgccctggtgttcggcgacggc
accctgctggaggtgcaagaaatgctgtccgatttggggtaa
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