Dermacentor silvarum: 119431127
Help
Entry
119431127 CDS
T07348
Name
(RefSeq) THO complex subunit 1 isoform X2
KO
K12878
THO complex subunit 1
Organism
dsv
Dermacentor silvarum
Pathway
dsv03013
Nucleocytoplasmic transport
dsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119431127
09122 Translation
03013 Nucleocytoplasmic transport
119431127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119431127
03041 Spliceosome [BR:
dsv03041
]
119431127
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119431127
Spliceosome [BR:
dsv03041
]
Complex C
Other components
EJC/TREX
119431127
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119431127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
119431127
NCBI-ProteinID:
XP_037554532
LinkDB
All DBs
Position
10:complement(6273043..6299173)
Genome browser
AA seq
675 aa
AA seq
DB search
MDDSVSDTGPFAHVIRKIEKLIRRYLEGELAIEHVVQGIRSIAIQEIDNRRQAVDLASKK
ILSVLLCRGLNKDTANHLIDLSITLAREPDLCSGSLPVLLLCDVFDSLPLNESEEFFSLV
EDKVSIWKEDIFFKCCKNQLLRTCNDLLRRLSRSQNTVFCGKILVFLAKLFPLSERSGLN
IASEFNAENITLFSSEDYKGLSDESSYHEESEEGSASSVPVDYNLYRKFWSLQEYFRQPL
LCYSKVHWRQFTSYSADVLSVFGSFKLDDIKTAQWALPGSSSSPSGKSVYFAKYLTSQKL
LELELSDSNFRRYVLVQFLILFQYLQSTVRFKLDSHVLTEEQSAWVKNTLTQVYKLLEET
PPDGAGFATRIKHILQREESWNAWKNEGCPDFKEARPVEQTREVRPKRKLGDEVKAALAS
KRVVLGDTEMNRLWNLCPDNWEACSSPKRDFVPSLEKFFDMTADQGDPVAGAKSRAKIIY
QSNSGWRALRLLSQKSPHFFTSSNQPIKSLPLYLESMVMRLAKELPVNTQNSAPSQAADE
KTDMADYGDSEDELLKNHDESKEAARDTALSGTGGGGDCGGSEPKDVLGKDELAVLAGAL
GADWKKLAPLLSFGEDEILYIASEHEGDAVKQAYQALLVWLEQEPEQATHGNLLQLAARA
GLKGKMTSLLATEAQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggatgattctgtatctgacacgggtcctttcgcgcacgtaatcagaaagattgaaaaa
ctcatcagacgctatctggagggcgagttggccatcgaacatgtcgtacaggggataaga
tcgatcgcaatacaagaaatagacaatcggcggcaggctgtcgacttggcctcgaagaag
atcctctcagtcctcctgtgtaggggattgaacaaggacacagccaatcacctgattgac
ctctccatcaccctggcaagggaacccgacctctgctcgggcagcctgccagtgctcctt
ctgtgtgacgtcttcgatagcctgcccctcaacgagagtgaggagtttttcagccttgtt
gaagataaagtcagcatctggaaagaggatatattcttcaagtgctgcaagaaccagctg
ctgaggacatgcaatgacttgctccgaaggctgtcaagatcacagaacacggtgttctgt
ggaaagatccttgtttttttggcaaagctgtttcctctttcggaacgttctggtttgaac
atagccagtgagttcaacgctgagaacatcacattgttcagctcagaggactacaaaggg
ctttcagatgagagttcgtaccacgaggagtctgaagaaggatctgctagctccgtgccc
gttgactacaacctgtaccgcaagttctggtcactacaggagtacttccggcagcctctc
ctgtgctacagcaaagtccactggcggcagttcacatcgtactcggcagatgtgctatca
gtgtttggcagcttcaagctggatgacatcaagacagcacagtgggcactaccaggcagc
tcaagcagtccatccgggaagtcggtgtactttgccaagtacttgaccagccagaagctg
ctggagctggagctgagcgacagcaacttccggcgctacgtcctggtgcagttcctcatc
ctctttcagtacctgcagtctaccgtgcgcttcaaactagactcgcacgttttaacagag
gaacagtccgcctgggtgaagaacaccctgacacaggtttacaagctgcttgaggagacg
ccacctgatggggctggctttgccactcgcatcaagcacattcttcagagagaggagtcg
tggaatgcgtggaaaaacgaaggctgcccagactttaaggaagcccggcccgtagaacaa
acgcgagaagttaggcccaagaggaaacttggagatgaggtgaaagcagcactggccagc
aagagagttgttcttggcgacactgagatgaaccggctgtggaacctgtgcccggacaac
tgggaagcatgctcatcgcctaagcgggactttgttcctagcttggaaaagttctttgac
atgacagcggaccaaggtgaccctgttgctggtgccaagagccgagccaagatcatatac
cagagcaattcggggtggcgggctttacgcctgctgtcccagaagtcaccacacttcttc
acaagcagcaaccagcctatcaagagcctgcctctctacctagagtctatggtgatgcgc
ctggccaaggagttgcccgtcaatacacagaattcagccccgtcccaggcagctgatgag
aagacagacatggctgactacggagacagcgaggatgagctgctcaagaaccacgacgaa
agcaaggaggcagctcgggacacagcattatcgggcaccggtgggggtggtgactgtggt
ggcagcgagccaaaggacgtgctcggcaaggatgaactggcagtgctggccggggcgctg
ggcgccgactggaaaaagctggcgccattgctgagcttcggtgaagacgagatcttgtac
atcgcctctgagcacgagggcgacgcggtgaagcaagcctaccaggcgctgctcgtctgg
ctagagcaggaacctgagcaggcgactcacggcaaccttctgcaactggccgccagggcg
gggctcaagggcaagatgacgtcgctcttggccacagaagcacaataa
DBGET
integrated database retrieval system
