Dermacentor silvarum: 119431445
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Entry
119431445 CDS
T07348
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dsv04040
]
119431445
Ion channels [BR:
dsv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119431445
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
119431445
NCBI-ProteinID:
XP_049514094
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Position
10:30489300..30661721
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AA seq
1170 aa
AA seq
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MVGDKIPLVTALRTVPINSIQLQNLRFRPGLLEPTAMKVVKLLKFERKLNSTRIDAAIGE
ALIKAAEKGNLREFERLFTADEKRLQFRDSRGRAAVHHAAAHNRVNILDFILKHDGDLTM
LDYEDNTPLHAACEHEACDAITFLIDNGANTSVLNKNVQSPLHLSTQLNKVKSLQELVKH
RDKLDTNLRSKHGRTALHLAAIYDHAECARILLSQFGASPKITCDNGYYPIHEAAKNASA
NAIEALLEWGESSGYSRAEMMKLYDADGNVPLHSAVHAGDIKAVQLCLESGALISTQQHD
LSTPVHLACAQGAMDIVRLMFQRQPDQRVHCLTCSDAQQMTPLHCAAMFDHVELVEYLVS
EGASMNATDKEGRTVILLAAARGAWKTVTALLRLDADLSVKDNLRRNLLHHIVLSGGLLD
DFYGEINERLKDFALLLNERDIQGCTAMHYASRNGQLKTIESLLHFGAIVNLKNNDNQSP
LHFAARYGRYNTVRHLLESKKGHLIINEMDGEGKTPLHIASQNGHTRVVHLLLVKGALLH
RDHKGRTPLHYAVTNGFTHTMEQLLAVHSHLLDQTDRDGNTALHLAAMHNKANTASLLLS
LNCKISHNEQDFTPIDYALHYKHSEVTMTMVTHPSRSEEVMSCRTKRYTCLVEGLTAVMP
EVMMAVLDRGITKSKYSHDSTSYYVKHSFQALQNTEGVGDIVPETDQPLPVMNIMVRYGR
EELLSHPLCVKYLETKWNSYGMYFHMLNLAVYTVFLAFLTTNAVQLMSEKTERENFTQVT
SEQLATAFVHPSTATMVALTSVIVLAFVGLNIVKEFYQMYQQRAKYFLDIMNVLEWTLYI
SGGLMAAGHLSTTVVDRSNQYIMAALAVFLAWFNYLLYLQRFNRIGLYVVMFLEILSTLL
KVMFVFSVLIIAFGLSFHILLAKIDINVKTPVVDPYTGNITMRAMNMSDKGFHNPLISLV
RVGTMMLGELDFLGTYLRPMRALESSAWYQIVAATWFLVVFIVLMPILLMNLLIGLAVGD
IETVRRNAQLKRLTMQVELHTDLERKLPRRILTMVDKTEVYVYPNQKGSSSYVWQTIQRW
FASPRENGKRGRAFAGGGGVPDNSLQELCVELKRQKQRMKEMSRALEQQLSLMRLVVHKL
EIRTENDEMDEGHFENIQDRPLSATTQSSL
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggtcggagacaagatacccctggtcacagccctgcggacggttcccatcaactcgata
cagctgcagaaccttcgcttccgaccgggcttgctcgaaccgaccgcgatgaaagtggtc
aaactgctcaagttcgagcgcaagctcaactcgactcgcatcgacgctgccatcggtgaa
gccctaatcaaggcagctgagaaaggaaacctacgtgagttcgagcgcctcttcacggcc
gacgagaagcgtctccagttccgcgacagccgaggccgggcagccgttcaccacgccgcg
gcccacaaccgggtcaacatcctcgacttcatcctgaagcacgatggcgacttgacgatg
ctggactacgaggacaacacgcccctgcacgccgcgtgcgagcacgaagcctgcgacgcc
atcactttcctcatcgataacggagctaacacgagcgtgctcaacaagaacgtccagagc
ccgctgcacctgagcacgcagctcaacaaggtcaagtccctgcaggaacttgtcaagcac
cgagacaagctcgacacaaacctaaggagcaaacacggacgcacggcccttcatctggct
gccatctacgaccacgcggagtgcgccaggatactgctgagtcagttcggagcttcgcca
aagataacatgtgacaacggctactaccccatccacgaagcggcaaagaatgcatcggcg
aacgctatcgaagcattgctggaatggggcgagtctagcggctactcccgagctgagatg
atgaaactctacgacgccgatggcaatgtgcctctccactcagccgtccatgccggagac
ataaaagcggttcagctgtgcctggagagcggcgcgctgatcagcacccaacagcacgac
ctgtcgacgcccgtgcatctggcatgcgcccagggcgccatggacatcgtgcgtctcatg
ttccagcgacagcccgaccagcgggtgcactgcctcacctgcagcgacgcccagcagatg
acgccactgcactgcgccgccatgttcgaccacgtcgagctcgtcgagtacctcgtctcc
gagggtgccagcatgaacgccacggacaaggaaggccgcacggtgatcctgctggcggcg
gcgcgcggcgcctggaagacggtgactgccctgctgaggctggacgccgacctgagcgtg
aaggacaacctgcgccgcaacttgctgcatcacatcgtgctcagcggggggctcctggac
gacttctacggggagatcaacgagcgactgaaagactttgccctgctgctcaacgaacgc
gacatccagggctgcacagcgatgcattacgcttccaggaacggccagctcaaaacaatc
gagagcctgcttcacttcggcgccatcgtaaacctcaagaacaacgacaatcagtcaccc
ctgcacttcgctgcgaggtacggtcgttacaacacggttcgccacctgctcgaaagcaaa
aagggtcacctgatcatcaacgagatggacggcgagggcaagacacctctgcacatagct
tctcagaatggacataccagggtggtccacctactcctggtcaaaggcgcactacttcac
agggaccacaagggaaggactcctctccactacgcagtcaccaacggcttcactcacacc
atggaacagctactagcagtgcattcacacctgctcgatcagactgaccgtgatgggaac
acagccttgcacttggccgccatgcacaataaggcgaacacggcgtcccttctgctgagc
ctcaactgcaagatttctcacaacgagcaggacttcacgcccatagactacgctctacac
tataagcacagcgaggtgaccatgaccatggtcacgcatccgtccaggagtgaagaagtg
atgagctgtcgaacaaagcggtatacgtgcctcgtcgaaggacttacggcagtgatgcca
gaagtcatgatggctgttttggaccgggggataaccaaatccaagtacagtcatgattcc
acttcctattatgtaaagcatagctttcaagcccttcagaatacggaaggcgttggggac
atcgtacctgaaactgatcaacctctacctgtgatgaatattatggtgagatatgggcgc
gaagaactcctgtctcatcccctgtgtgtcaagtatttagagacaaaatggaactcgtac
gggatgtattttcatatgttaaacctcgccgtgtataccgtgttcttggctttcttgacg
acgaacgccgtgcagctcatgagtgagaaaacggaaagagagaatttcacgcaagtcacg
tcagagcagctcgccactgcttttgtccatccatccaccgctaccatggtcgctttgacg
tctgtgattgtgctggcatttgttgggttgaacattgtaaaggagttttaccagatgtat
caacagcgagccaagtacttcttggacatcatgaacgtcttggaatggacactctacatt
tccggtggtttgatggctgccggccacctatcgacaactgtggttgatcgaagcaaccag
tacatcatggccgcgttggccgtgttcttagcgtggttcaactatctgctctatctgcaa
aggttcaaccggatcggcctttacgtcgtcatgttcctagaaatattgtccacgttacta
aaggtcatgttcgtcttctccgttctaataattgccttcggcttgagcttccatattctc
ctcgccaaaattgacatcaatgtgaaaacgccggtcgttgacccctacacaggaaacatc
acaatgcgagcaatgaacatgagcgacaagggtttccacaacccgctgatatccctagtg
cgtgtcggcactatgatgctcggggagctggacttcctgggcacataccttcggccgatg
cgtgccttggagtcgtcggcctggtaccagatcgtggccgccacctggtttctcgtagtc
ttcatcgtactcatgcctatcctactaatgaacctgctcatcggcttggccgtcggcgac
atcgaaaccgtccgccgtaacgcacaactcaagaggctcacaatgcaggtggagctgcac
actgacctcgaacgcaagctgcctcgtcgcatcctgaccatggttgacaagaccgaagtc
tacgtgtaccctaaccaaaagggctcttcgtcttatgtctggcagacaatacaacgctgg
tttgctagccctcgagaaaacggcaaacgaggcagagcgtttgcaggtggtggcggagtg
ccggacaactcacttcaggagctgtgcgtcgagcttaaaaggcagaagcaaagaatgaaa
gagatgtcgagggctttggaacagcagctctctctaatgcggctcgtcgttcataagttg
gagattcgaaccgagaacgacgagatggacgaaggacacttcgagaacatccaggaccgg
ccgcttagcgcgacgacgcagagcagcctatga
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