Dermacentor silvarum: 119431529
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Entry
119431529 CDS
T07348
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsv04121
]
119431529
Enzymes [BR:
dsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119431529
Ubiquitin system [BR:
dsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
119431529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119431529
NCBI-ProteinID:
XP_049513079
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All DBs
Position
10:complement(51503639..51709546)
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AA seq
666 aa
AA seq
DB search
MKTGRMNVTIRLHCANTGCLPVNGRDVSNASHEEAVAAFRAASEPIVVEVLRRERRNGTG
SSSSTSAEAEVAAPEEAAANRLSSRPPASPRAAPTRRRRLNFRGGHRLPWEGSFLPNGLS
IPPPPLSPPSRNEDQDDDDGYDIEYEEVTLIRNGNEKLGLTLCYGDPDEQETEIYVGEID
PRSVAAKDGRLQKGDQILQVNGTDVLGRDQAIALFSEQRPDFTLLVARTHVSEESCSEEH
SNFSLPRRRYSSVLEEDEDEEGNEKDVTATPNKADAPQQTSFQEELSETETQVGTPLPDN
DLEMSVLANEFQRVILDKKAVSVEQWLHQGSSGLPTSPQKWDAADSGSSAYHTGGSSSAS
PPTLELGGRSGSLLSLAGATVSTPTHPFVPHMTRTGTAVGSSGHGTGPTEDKSTQMRDSD
LQSLTSCESCRCHLDFATSPRRLPKTVSEPACVRRGSSVPDYASLYPTMYTNPQNLQHTM
WLQQHLFREALAKRNGRVHATKSTSVATTTTTVSTKKEQLVSAAGEPGGEETDLKSQWKV
KRRADGTRYITRRPARTKLLKEREQKILEERSGLTTDDDNHSELKTGKYWTKEERKRHLE
KARDRKKKEMMLKLKMAILKEAHEGSGTKKSTTSAASRKKREVSPSPEALVVVGDKAFGL
LAVTTV
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactggtcgaatgaacgttacaattaggttacactgcgcgaatacaggctgccta
ccggtgaacggccgagacgtgtcgaacgcgtctcacgaggaggcagtggcggcgttccgc
gccgcctcggagcccatcgtggtcgaggttctgcgcagggagcgcaggaacggaaccgga
agtagctcgtcgacttcggcggaagcggaagtagctgcgccggaggaggccgcggcaaac
aggctgtcgtctcgccctccggcttcccccagggctgcaccgacgcggcggcgcagactg
aatttccgtggtgggcaccgcctcccgtgggaagggtcgttcctcccaaacgggttaagc
ataccaccacctccactgagcccaccgagcagaaatgaagaccaagacgatgacgatggc
tacgacatagaatacgaggaggtcacgctaataaggaatggaaacgagaagcttggactc
accctctgttacggtgacccggatgaacaagagacggaaatttacgtgggcgagattgat
ccaagaagtgttgctgcgaaagacggaagactacagaagggtgaccaaatactccaagtt
aacgggaccgacgtgctaggtcgggatcaagctatagcgttgttctccgagcagaggcct
gactttacgctgctcgtagcaaggacacatgtctcagaagagtcgtgtagcgaagagcac
tccaacttttctcttcctcgacgccgttacagttctgttctggaagaagatgaggatgaa
gagggaaacgagaaagatgtcactgccacgcccaacaaggctgatgctccacagcagaca
agctttcaagaagagctgtcggaaaccgaaacacaggtgggtacgccgctgccggacaat
gacctcgagatgagcgttctggccaacgagttccagagggtcattctggacaagaaggcc
gtatcggtcgagcagtggctacaccagggctcctcgggtctacccacgtcaccccagaag
tgggacgcggccgatagcgggtccagtgcctaccacacgggtggatcgtcgtccgcttcg
ccgcccaccctagagctcggcggaagatccggctccttgctatcgctagcgggagccacg
gtgtccacgcccacgcatcctttcgtgcctcacatgacgaggactggcacggccgtaggg
tcctcgggacacgggacggggcccacggaggacaagtcaacgcagatgcgagattccgac
ctgcagagcttgacgagctgcgagtcctgtcggtgtcacctggacttcgccacgtcaccg
cgacggctacccaagacggtcagcgagccggcgtgcgtcaggcgcggctcgtcggtgccc
gactacgcctcgctctaccccaccatgtacacgaacccgcagaacctgcagcacaccatg
tggctgcagcagcacctcttccgcgaagccctggcgaaacgcaacggtcgagtccacgcg
accaagtcgacgtccgtcgccaccacgacgacgacggtttcgacgaagaaggagcaactg
gtctccgccgccggcgaacctggcggtgaggaaacggacctcaagtctcagtggaaggtg
aagaggagggccgacgggacgcgatacatcacccggcggccggccaggacaaagctgctg
aaggaacgcgagcagaagatcctcgaggagcgaagcgggctgaccactgacgacgacaac
cactcggagctgaagaccggcaagtattggaccaaggaggaaaggaagaggcacctcgag
aaggctcgtgaccgcaagaaaaaggagatgatgctcaagctcaagatggccatcctcaag
gaggcccacgagggatcgggcaccaagaaatccacgacgagcgcagcgtctcgaaagaag
cgcgaggtgtcaccttcgccagaggccctggttgtcgtcggggacaaggcctttggactt
ctagccgtcacgactgtgtag
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