Dermacentor silvarum: 119431902
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Entry
119431902 CDS
T07348
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
dsv
Dermacentor silvarum
Pathway
dsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119431902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119431902
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119431902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119431902
NCBI-ProteinID:
XP_037555271
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All DBs
Position
10:complement(57641014..57677986)
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AA seq
1159 aa
AA seq
DB search
MSRHRNVRTMNYDDDYEGYYDVYGRSQEEDSCISPTTEEQFLYNRDKLHSMSSFLSPEAL
QEENEEDDEEEDGAHKSGPQEPELSPVDEVRLYECIEKMQNVVGDSIPEATLRRAALEGD
FNAEVALDHLLQEADKPKPQREPRKRESDSDDDDSCVVSPSDTVFDGGGASAMVPLNLRT
IVANFDAPAKCRSDNARMLDGGEHVGGAAVPANSGTESAMPSKFALSSPSMCTVETSGCE
LKLDELLKSSGLGESHRTDSLSKAAHSISGCDDAPPVLAHLDCETVPATSLTHASSATYD
LSPNHQACDTDSVDDFLETLLQEGNAPSATSQRKPTAQASVAVPDELDILLGMVSSYKPR
PATPTDTLRDNGRTASASVSHEALSLGRPTKDPVGDSLDALLGIGADSAVTPQQGGEDAA
KTDFDDFLMSLRSDIGGTSDLKAQDDGLALLPIADILSVASSDEKGPGKLPQKPELKQPA
LLNLGEILGLNREHTPDSAVESGALKLDDILKGAAGSPAVAEHESGPYGNDGESPELSPL
HSATAVTVKEASLFGKVLVYFHFVRRQKSVFDLTSWLRKLGLLEPRPGEKARTAAFNFGV
PSPDDVVRACRKRAVEASERKPLTPLEQVGAPVRAAGANKELLPAVDSALRQTFPRQPQL
DVEDRRSKASSETLKVPSATSSNRSSPDLDRKEPSPEAAGDTQPADGATPKTPRSKPPKD
VAAEYAKERGSTKSLLNLVVIGHVDAGKSTLMGHLLYRLGCVQKKQMHKYEQESKKLGKA
SFMYAWVLDETSEERNRGITMDVAQAKFETPNRSIVLLDAPGHRDFIPNMITGAAQADVA
ILVVDATRGEFETGFETGGQTREHTLLVRSLGVSQLAVAINKLDNVSWDEGRYNEITAKL
RSFLRQAGYRESDFTFVPCSGLTGENLTTKPEPGSPLTKWYTGPCLVDVIDSFKPPERPV
SKPFRLCVSDVFKGQGSGFCVSGRIDAGCAANGDKVLVMPAAEQGTVKGITIDELPVTQA
FAGDQVALTLAGVDMIKVTTGSFLCDPALPIRVSTRFQARLVVFNIEVPLTRGFPVVLHY
QSTTEQASIHRIISQLNKVTGEVVRNKPRCLVKNTSGLVEIKVSRPICVELYKEFKELGR
ITLRSGGSTVAAGVITEVM
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcaccgaaatgttcggactatgaattatgatgacgactacgaaggctactac
gatgtctacggcaggtcccaggaagaagactcgtgcatatctccgaccacagaggagcag
ttcctgtacaacagggacaagcttcattccatgtcgtcattcctgtctcccgaagccctc
caagaggaaaatgaggaggacgacgaagaagaggatggagcccacaagtccggccctcag
gaacccgaactcagccccgtagacgaagtgaggctctacgagtgtattgagaagatgcag
aacgtggtgggcgactcgatcccagaggctacgcttcgtcgagcggcactcgagggagac
ttcaatgcagaagtggctcttgaccatcttctgcaagaagcggacaagccaaagccgcag
cgagagccacggaaaagagaatcggacagcgatgacgatgactcttgtgtcgtttcgccg
tctgacaccgtgtttgatggtggtggggcgtcggcgatggtaccgcttaacttgaggacc
attgtcgcgaactttgacgcgccggcgaaatgccggagcgataacgcgcgaatgttggac
ggtggtgaacacgtaggtggagctgccgtgccagctaattcagggacagagtcggcaatg
ccttcaaagtttgctctttcttctccctccatgtgtacagttgaaacttcaggttgtgaa
ttaaaactggacgaattgctcaaatcaagtgggttgggggaatctcataggacagacagc
ttatcgaaagctgcgcacagtattagtggttgtgacgatgcaccgcccgttcttgctcat
cttgactgtgaaacagtacctgctacatcactcacccatgcttcaagcgctacttacgat
ctcagtcctaaccatcaagcttgtgatacagactctgttgatgactttcttgaaacactt
ctccaagaaggaaatgcgccgagtgctacctcgcaacgaaaacctacggcacaagcatca
gttgcagtgcctgatgaactggacatactgttgggcatggtctcgagctacaagccccgt
cctgctaccccgacagatactttaagagacaacggccgaactgcttctgcgagtgtgagt
cacgaagcactgtctttaggcagacctacaaaagatccagttggagacagcttagacgca
cttctgggaattggtgcagactctgctgtgactccgcaacaaggcggcgaagatgcggcc
aagacggacttcgacgactttctcatgtcattgagaagtgacattggtggcacgagcgac
ttaaaagcacaggatgatggtctggcgctgttgcccatcgcagatattttgtctgtggct
tccagcgatgaaaaaggcccagggaagctcccgcagaaaccggaattgaagcagcccgcc
ttgctcaatctcggcgagatacttggtctgaacagggagcacacccccgattcagctgtt
gaaagtggagctctcaagctagatgacattctgaaaggtgccgcgggaagtccagcggtc
gccgaacatgagagcggcccatacggcaacgatggcgagagccccgagctgagtccgtta
cacagtgcgacggccgtgaccgtgaaagaagcgtccctttttggcaaagtgctcgtgtac
ttccattttgtccggcgacagaagtctgtctttgatctcacgagttggttgaggaaactt
ggtctgctggagccaaggcccggtgaaaaagcgaggacagcagcgttcaatttcggtgtg
ccgtcgcccgacgacgttgtgcgcgcgtgtcggaagcgagcagtggaggcatcagaacgg
aagccgctcacacctctcgagcaagttggcgcacctgtcagagctgctggggcgaacaag
gagctgctgcccgccgttgactcggcactgaggcagacgtttcccaggcagcctcagctt
gatgtcgaggacaggcgcagcaaggcatcgtcggaaactctcaaggtgccgagtgcgaca
agctccaaccgtagttctccggatctggatcgtaaggagccctctccggaagctgccggg
gacacgcagccggccgacggtgccactcccaagacaccaaggtccaagccacccaaggac
gtggctgcagaatatgccaaggagaggggctcgaccaagtctctcctcaacttggtggtc
attgggcatgtagacgctggcaagagcacactcatgggtcacctcctgtacaggcttggc
tgtgtacagaagaagcagatgcacaagtatgagcaggagtccaaaaaactgggaaaggct
tcgtttatgtatgcctgggtattggacgagacgtcagaagagaggaatcgtgggatcacc
atggacgtggctcaggcgaagtttgagacacccaacagaagcatcgtactcttagacgca
ccgggtcatcgggacttcatcccaaacatgatcacaggtgctgcccaagcggacgttgcc
atcctagtggttgacgctacgcggggtgaattcgaaactggtttcgaaacgggagggcag
acaagggagcacaccttgctcgtgcggtcactaggtgtgtcgcagcttgcggtggccatc
aacaagctggacaatgtctcctgggacgaggggcgctacaacgaaatcacggccaagctg
cgcagtttcctgcgccaagctggctatcgggagtctgacttcaccttcgtgccttgcagc
ggcctgacgggcgagaatctgaccaccaagcccgagcctggttcaccactcaccaagtgg
tacacgggaccctgccttgttgatgttatcgatagcttcaagccacctgagcggcccgtg
tcaaagccgttccggctgtgtgtgagtgatgtcttcaagggccagggctccggcttctgt
gtgtctggccggatagacgcaggctgtgcggccaatggtgacaaagtcctcgtgatgcca
gcagccgagcagggaactgtaaaaggtatcaccattgatgaattaccggtaactcaggcc
tttgctggagaccaggtggcactgactctggccggggtcgacatgatcaaggtcactacg
ggaagcttcctctgtgatccggctctcccgatccgagtgtcgacacggttccaggcgcgc
ctggtggtgttcaacattgaggtgcccctgacgaggggcttccccgtcgtgcttcactac
cagagcaccacggagcaggcttccatccatcgcatcatttcccagctgaacaaggtcacc
ggtgaagtggtgcgcaacaagccaaggtgtttagtgaaaaacacaagtggcctggttgaa
atcaaggtgagccgtccgatatgtgtggagctctacaaggagttcaaggagctcggccgc
atcactcttcggtcaggtggcagcactgtagctgctggcgttatcactgaggtgatgtga
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integrated database retrieval system