KEGG   Dermacentor silvarum: 119431902
Entry
119431902         CDS       T07348                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
dsv  Dermacentor silvarum
Pathway
dsv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dsv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    119431902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsv03019]
    119431902
Messenger RNA biogenesis [BR:dsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     119431902
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1
Other DBs
NCBI-GeneID: 119431902
NCBI-ProteinID: XP_037555271
LinkDB
Position
10:complement(57641014..57677986)
AA seq 1159 aa
MSRHRNVRTMNYDDDYEGYYDVYGRSQEEDSCISPTTEEQFLYNRDKLHSMSSFLSPEAL
QEENEEDDEEEDGAHKSGPQEPELSPVDEVRLYECIEKMQNVVGDSIPEATLRRAALEGD
FNAEVALDHLLQEADKPKPQREPRKRESDSDDDDSCVVSPSDTVFDGGGASAMVPLNLRT
IVANFDAPAKCRSDNARMLDGGEHVGGAAVPANSGTESAMPSKFALSSPSMCTVETSGCE
LKLDELLKSSGLGESHRTDSLSKAAHSISGCDDAPPVLAHLDCETVPATSLTHASSATYD
LSPNHQACDTDSVDDFLETLLQEGNAPSATSQRKPTAQASVAVPDELDILLGMVSSYKPR
PATPTDTLRDNGRTASASVSHEALSLGRPTKDPVGDSLDALLGIGADSAVTPQQGGEDAA
KTDFDDFLMSLRSDIGGTSDLKAQDDGLALLPIADILSVASSDEKGPGKLPQKPELKQPA
LLNLGEILGLNREHTPDSAVESGALKLDDILKGAAGSPAVAEHESGPYGNDGESPELSPL
HSATAVTVKEASLFGKVLVYFHFVRRQKSVFDLTSWLRKLGLLEPRPGEKARTAAFNFGV
PSPDDVVRACRKRAVEASERKPLTPLEQVGAPVRAAGANKELLPAVDSALRQTFPRQPQL
DVEDRRSKASSETLKVPSATSSNRSSPDLDRKEPSPEAAGDTQPADGATPKTPRSKPPKD
VAAEYAKERGSTKSLLNLVVIGHVDAGKSTLMGHLLYRLGCVQKKQMHKYEQESKKLGKA
SFMYAWVLDETSEERNRGITMDVAQAKFETPNRSIVLLDAPGHRDFIPNMITGAAQADVA
ILVVDATRGEFETGFETGGQTREHTLLVRSLGVSQLAVAINKLDNVSWDEGRYNEITAKL
RSFLRQAGYRESDFTFVPCSGLTGENLTTKPEPGSPLTKWYTGPCLVDVIDSFKPPERPV
SKPFRLCVSDVFKGQGSGFCVSGRIDAGCAANGDKVLVMPAAEQGTVKGITIDELPVTQA
FAGDQVALTLAGVDMIKVTTGSFLCDPALPIRVSTRFQARLVVFNIEVPLTRGFPVVLHY
QSTTEQASIHRIISQLNKVTGEVVRNKPRCLVKNTSGLVEIKVSRPICVELYKEFKELGR
ITLRSGGSTVAAGVITEVM
NT seq 3480 nt   +upstreamnt  +downstreamnt
atgtctcgtcaccgaaatgttcggactatgaattatgatgacgactacgaaggctactac
gatgtctacggcaggtcccaggaagaagactcgtgcatatctccgaccacagaggagcag
ttcctgtacaacagggacaagcttcattccatgtcgtcattcctgtctcccgaagccctc
caagaggaaaatgaggaggacgacgaagaagaggatggagcccacaagtccggccctcag
gaacccgaactcagccccgtagacgaagtgaggctctacgagtgtattgagaagatgcag
aacgtggtgggcgactcgatcccagaggctacgcttcgtcgagcggcactcgagggagac
ttcaatgcagaagtggctcttgaccatcttctgcaagaagcggacaagccaaagccgcag
cgagagccacggaaaagagaatcggacagcgatgacgatgactcttgtgtcgtttcgccg
tctgacaccgtgtttgatggtggtggggcgtcggcgatggtaccgcttaacttgaggacc
attgtcgcgaactttgacgcgccggcgaaatgccggagcgataacgcgcgaatgttggac
ggtggtgaacacgtaggtggagctgccgtgccagctaattcagggacagagtcggcaatg
ccttcaaagtttgctctttcttctccctccatgtgtacagttgaaacttcaggttgtgaa
ttaaaactggacgaattgctcaaatcaagtgggttgggggaatctcataggacagacagc
ttatcgaaagctgcgcacagtattagtggttgtgacgatgcaccgcccgttcttgctcat
cttgactgtgaaacagtacctgctacatcactcacccatgcttcaagcgctacttacgat
ctcagtcctaaccatcaagcttgtgatacagactctgttgatgactttcttgaaacactt
ctccaagaaggaaatgcgccgagtgctacctcgcaacgaaaacctacggcacaagcatca
gttgcagtgcctgatgaactggacatactgttgggcatggtctcgagctacaagccccgt
cctgctaccccgacagatactttaagagacaacggccgaactgcttctgcgagtgtgagt
cacgaagcactgtctttaggcagacctacaaaagatccagttggagacagcttagacgca
cttctgggaattggtgcagactctgctgtgactccgcaacaaggcggcgaagatgcggcc
aagacggacttcgacgactttctcatgtcattgagaagtgacattggtggcacgagcgac
ttaaaagcacaggatgatggtctggcgctgttgcccatcgcagatattttgtctgtggct
tccagcgatgaaaaaggcccagggaagctcccgcagaaaccggaattgaagcagcccgcc
ttgctcaatctcggcgagatacttggtctgaacagggagcacacccccgattcagctgtt
gaaagtggagctctcaagctagatgacattctgaaaggtgccgcgggaagtccagcggtc
gccgaacatgagagcggcccatacggcaacgatggcgagagccccgagctgagtccgtta
cacagtgcgacggccgtgaccgtgaaagaagcgtccctttttggcaaagtgctcgtgtac
ttccattttgtccggcgacagaagtctgtctttgatctcacgagttggttgaggaaactt
ggtctgctggagccaaggcccggtgaaaaagcgaggacagcagcgttcaatttcggtgtg
ccgtcgcccgacgacgttgtgcgcgcgtgtcggaagcgagcagtggaggcatcagaacgg
aagccgctcacacctctcgagcaagttggcgcacctgtcagagctgctggggcgaacaag
gagctgctgcccgccgttgactcggcactgaggcagacgtttcccaggcagcctcagctt
gatgtcgaggacaggcgcagcaaggcatcgtcggaaactctcaaggtgccgagtgcgaca
agctccaaccgtagttctccggatctggatcgtaaggagccctctccggaagctgccggg
gacacgcagccggccgacggtgccactcccaagacaccaaggtccaagccacccaaggac
gtggctgcagaatatgccaaggagaggggctcgaccaagtctctcctcaacttggtggtc
attgggcatgtagacgctggcaagagcacactcatgggtcacctcctgtacaggcttggc
tgtgtacagaagaagcagatgcacaagtatgagcaggagtccaaaaaactgggaaaggct
tcgtttatgtatgcctgggtattggacgagacgtcagaagagaggaatcgtgggatcacc
atggacgtggctcaggcgaagtttgagacacccaacagaagcatcgtactcttagacgca
ccgggtcatcgggacttcatcccaaacatgatcacaggtgctgcccaagcggacgttgcc
atcctagtggttgacgctacgcggggtgaattcgaaactggtttcgaaacgggagggcag
acaagggagcacaccttgctcgtgcggtcactaggtgtgtcgcagcttgcggtggccatc
aacaagctggacaatgtctcctgggacgaggggcgctacaacgaaatcacggccaagctg
cgcagtttcctgcgccaagctggctatcgggagtctgacttcaccttcgtgccttgcagc
ggcctgacgggcgagaatctgaccaccaagcccgagcctggttcaccactcaccaagtgg
tacacgggaccctgccttgttgatgttatcgatagcttcaagccacctgagcggcccgtg
tcaaagccgttccggctgtgtgtgagtgatgtcttcaagggccagggctccggcttctgt
gtgtctggccggatagacgcaggctgtgcggccaatggtgacaaagtcctcgtgatgcca
gcagccgagcagggaactgtaaaaggtatcaccattgatgaattaccggtaactcaggcc
tttgctggagaccaggtggcactgactctggccggggtcgacatgatcaaggtcactacg
ggaagcttcctctgtgatccggctctcccgatccgagtgtcgacacggttccaggcgcgc
ctggtggtgttcaacattgaggtgcccctgacgaggggcttccccgtcgtgcttcactac
cagagcaccacggagcaggcttccatccatcgcatcatttcccagctgaacaaggtcacc
ggtgaagtggtgcgcaacaagccaaggtgtttagtgaaaaacacaagtggcctggttgaa
atcaaggtgagccgtccgatatgtgtggagctctacaaggagttcaaggagctcggccgc
atcactcttcggtcaggtggcagcactgtagctgctggcgttatcactgaggtgatgtga

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