Dermacentor silvarum: 119432447
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Entry
119432447 CDS
T07348
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119432447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119432447
Enzymes [BR:
dsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119432447
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119432447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HTH_12
Motif
Other DBs
NCBI-GeneID:
119432447
NCBI-ProteinID:
XP_037555538
LinkDB
All DBs
Position
11:19429849..19542667
Genome browser
AA seq
1421 aa
AA seq
DB search
MDLDKIPHRFVDGISFSVFSTEELLRQGVLEVTCAETFDIVGHPTKGGLHDALLGPSDRD
EVCATCGLGFTHCPGHIGYIKLPLLVFNPVFLRTLYQLLRGSCFACRRLLSPPVACQVAL
AQLQVLQYGAVGVVQELQDIANETLIDDSDKGRLTHRGAIRAALQRRIEQCVASVIDSVG
DVEEARRAADVKNVVECRQRIVKTFIREHLMGAPRKCPHCGELRRAMTIQNNSRFVYTSK
IRPVVKPPTSSLPFRRTYNGVEEEDYVLAEEEEERQRQAQQKQAEEEAAGGALSYLTPVE
ARAHLRELWTNERSLLQNLFGILALASNSHECPVDMFFLEALVVPPTRFRPMNFMNGRKY
ENAQTVSLSRVLQCCDTLRAVLKLLGRRGSDQSERPEDQMETERLEQLVSKVMGKDLDAK
MHFAWNALQVAVNVVVDSELDRLNINKGTPGIKQILEKKEGLFRKHMMGKRVNYAARSVI
SPDPYIDVEEIGVPMVFATKLSYPEPVTDRNIAELRRAVINGPDIYPGALLVEREDGVVM
RLDPTNRTRREAVAKQLLTPTEAHQHMLLRCKTVHRHLRSGDMLLLNRQPTLHKPSIMAH
KARVLPGERTLRLHYANCKCYNADFDGDEMNAHLPQSPLAQAEATEVASVNRQYLVPKDG
TPLSGLIQDHVIGGSLLTMQGRFFTREDYNQLVFGALTFVKMGIKLLPPAIQKPQMLWTG
KQVLSTVLLNCIPHGKPPPTVEGKAKIPAKAWSKGGETAANMTEGDVVIRDGELLCGILD
KAHYGPTQFGLVHVCYELYGGATSSLILSAFARLFTHYLQIFTGFTLGIEDILVTDKADK
KRKRIMKKAKTQGDAVAVKALGLENEEELDAIQLEDRLRAAHMARNDRQMKQLDSSMKGV
TDDVNNQINKACIPDGLLKKFPSNNLQLMVQSGAKGGMVNCMQISCLLGQIELEGRRVPL
MLSGRTLPSFLHYDTSPRAGGFVDGRFLTGIRPQEYFFHCMAGREGLVDTAVKTSRSGYL
QRCLIKHLEGLMVCYDQTVRDSDGSVIQFQYGEDGLDVLKMQMLKPSQFPVLIKNSQAVI
NRDAIEQCERATDHDELRKSKRAVRKWMKKMDEDGDTHTSHRQSAFTLFSQTQGSLVREE
HLSRFHNATSETARQAILEAYFNLDERALHKLNKSIVKCADPVCSKLRSDVHLGAVSERL
DTLIEDYVEKNPHGLLVAEDTEEEQAMEKKTVTADDFRKMVYMRNMKAICDPGEPVGLLA
AQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRMREILMVASANIATPTMDLHLLPHPDIE
QRAEELRVKITSINLSQVLEEVSVKETLHVKGRSERYRRYRVHFQFLPRRAYRKKLQATP
ARILRYMETDFLRRLIEAIKRKMEHVSSESAEHHAGWRNKA
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgataaaatccctcaccgcttcgtggacggcattagctttagtgtgttcagc
accgaggaactgctgcgacaaggcgtgctcgaagttacttgcgccgaaacttttgacatc
gtcggacacccgacgaaaggtggtctccacgatgccctgctcgggcctagtgaccgtgac
gaagtctgtgccacctgtggccttggcttcacgcactgcccaggccacattgggtacatc
aagctacccttgctcgtgttcaatcccgtgttcctcaggactctctatcagttgcttcgg
ggcagttgcttcgcctgccgccgtttgctttcgcctccagtcgcctgccaggtggcactg
gcacagctgcaagtgctccagtacggtgccgtcggtgtggtgcaagaactgcaggacatt
gccaacgagaccctgattgacgacagcgacaagggtcggctgacccaccgcggagccatc
agggctgcgctgcagcggcgcattgagcagtgtgtggcgtcggtcatcgacagtgttggc
gatgtggaagaggctcgtcgcgcagcagatgtgaagaatgtcgtcgagtgcaggcagcgg
atcgtgaagacgttcatccgcgaacatctgatgggggcaccgcgcaagtgcccgcactgc
ggagagttgcgccgagccatgaccatccagaacaacagccgctttgtgtacaccagcaag
atccgacccgtggtgaagccacccacctcgtccttgccctttaggcgtacgtacaatggc
gttgaggaagaggactacgtgttagccgaggaggaggaggagcggcagcgccaagcccag
cagaagcaggccgaggaagaggcggcgggcggtgcgctgtcctacttgacccccgttgag
gctcgtgcccacctgcgagagctgtggaccaatgagcgatcgctgctgcagaacctgttc
ggcatcctggccctcgcgtccaactctcacgagtgccccgtcgatatgttcttcctcgag
gcgctagttgtgcctccgacacggtttcgcccgatgaacttcatgaatggccgcaagtac
gagaatgcgcagacggtgagcctctcacgggtgctgcagtgttgtgacaccctgagagcg
gtgctcaagctgctcgggcgcaggggctcggaccagtctgagcggccagaggaccagatg
gagaccgagcggctcgagcaactggtgagcaaggtgatgggcaaggacctggacgcaaag
atgcactttgcctggaatgcgcttcaagtggctgtcaatgttgtggtggacagcgagctc
gatcggctcaacatcaacaagggcacgccgggcatcaagcagatcctggagaagaaagag
ggactctttcgcaagcacatgatgggcaagcgtgtcaattatgcggcgcgctcggtgatc
tcaccagatccgtacattgacgtggaggagattggtgtgcctatggtgtttgccaccaag
ctgtcatacccggagccggtcactgatcgcaacatagccgagctgcgaagagcggtcatc
aatggcccggacatttaccccggggcgctgctggtggaacgagaagatggcgtcgtgatg
cgactggacccaaccaaccgtacgcggcgagaggcggtggccaagcagctgctgactcca
accgaggcacaccagcacatgctgctccgctgcaagaccgtgcatcgacacctgcggtct
ggcgacatgctgctcctgaaccggcagccgacactgcacaagcccagcatcatggcgcac
aaggcgcgcgtgctgcccggggagcggaccctacggctgcactatgccaactgcaagtgc
tacaatgccgactttgacggagacgagatgaatgcgcacctgccacagagtcccctggct
caggcggaggccactgaggtggccagcgtcaaccggcagtacttggtgcccaaggacggc
acgccgctcagtggcctcatccaggaccacgtcattgggggctcactcctcaccatgcaa
gggcgcttcttcaccagagaggactacaaccagctcgtctttggagccttgacttttgtc
aagatgggcatcaagctcctgccaccggccatccaaaagccacagatgctgtggacaggc
aaacaggtgctgtcaaccgttctgctcaactgcataccgcatggcaagccacctcctacg
gttgaaggcaaggccaaaattccagccaaggcgtggtcaaagggtggtgaaactgcggcc
aacatgaccgagggtgatgtggtcattcgggacggtgagcttctctgtggcatcctcgac
aaggcccactatggtccaacccagtttggtctggtgcatgtctgctatgagctgtatgga
ggtgcgacgtccagcctgatactgagcgcctttgcaaggctcttcacgcactacctgcaa
attttcactggattcacccttgggattgaagacatccttgtcaccgacaaggctgataag
aagcgcaagcgcatcatgaagaaggccaagacgcaaggcgatgcagtggctgtcaaggct
cttggcctggagaatgaagaggagctggatgccatccagctggaggaccggctgagggca
gcacacatggcacgcaatgaccggcagatgaagcagctcgactccagcatgaagggcgtc
accgacgacgtcaacaaccagatcaacaaggcctgcattccagatggcttgctgaagaag
tttcccagcaacaacctacagcttatggtccagtctggggccaagggaggaatggtgaac
tgcatgcagatctcgtgcttgctgggccagattgaactggaagggcgccgtgtgccactt
atgctcagcggtcgtacattgccgtcctttctgcattatgacacatcaccacgggcgggt
ggcttcgtggacggccgctttctgacaggcatccggccgcaggagtacttcttccactgc
atggctggacgggagggtctggtggacacggctgtaaagaccagccgcagtggctacctg
caacgttgcctcatcaagcacctggaggggctcatggtctgctacgaccagactgttagg
gacagcgatggaagtgtcattcagttccagtacggagaggatggcttggatgtgctcaag
atgcagatgctcaagccaagccagttccctgtgctcatcaagaacagccaggcggtcatt
aaccgtgatgccatcgagcagtgcgagcgggccaccgaccacgatgaactgcgcaagtct
aagagagcggtgcgtaaatggatgaagaaaatggacgaagacggtgacacgcacacgtca
cacagacagagtgcattcaccctcttctcgcaaacccaagggtcgctagtgcgggaagag
cacttgagccgatttcacaatgcaacttctgagactgctcgtcaggcgatcttggaggct
tacttcaacctcgacgaaagggcacttcacaagctcaacaaatccattgtgaagtgtgcc
gacccagtctgttccaagctgcggagtgatgtccacctcggtgccgtgtctgaacggttg
gacactctaattgaagactacgtcgagaaaaatcctcatggcctcctcgtggctgaggat
acagaagaagagcaagccatggaaaaaaagactgtgactgcggatgacttccggaaaatg
gtctacatgcgaaacatgaaagccatctgtgacccgggcgagccagtgggcctgttagcc
gctcagagcatcggcgagccctcgacacagatgacactgaacacgtttcactttgcgggt
cgaggcgagatgaacgtgactctggggataccgcggatgagggagatcctcatggtagcc
agtgccaacattgcaaccccaaccatggacctacatttgctgccacacccggatattgag
cagcgtgctgaggagctacgagtcaagatcacatccatcaacctttcacaggtgctggag
gaagtgtccgtcaaggaaacgctgcacgtcaagggaaggtcagagcggtaccgccggtat
cgcgtccactttcagtttttgcctcggcgagcgtaccgcaagaagctgcaggctacaccg
gcgcggattctgcgctacatggagaccgatttccttcggaggctcattgaggccatcaag
cgcaagatggagcacgtctcctcggagagtgcagagcaccacgctggctggcgcaacaaa
gcgtga
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integrated database retrieval system
