Dermacentor silvarum: 119432503
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Entry
119432503 CDS
T07348
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119432503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsv03041
]
119432503
03009 Ribosome biogenesis [BR:
dsv03009
]
119432503
Enzymes [BR:
dsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119432503
Spliceosome [BR:
dsv03041
]
Complex A
U1 snRNP components
U1 related factors
119432503
Complex B
119432503
Ribosome biogenesis [BR:
dsv03009
]
Eukaryotic type
Pre-60S particles
Helicases
119432503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Fe-ADH
YtzH
Motif
Other DBs
NCBI-GeneID:
119432503
NCBI-ProteinID:
XP_037555599
LinkDB
All DBs
Position
11:32738018..32739972
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AA seq
536 aa
AA seq
DB search
MAQNGIPALGGFAVPPVAMPNEGVPAANINFGPPLFGFGQGFFNFGLGPLGMGRGNLQQP
QGVGDNLTTLFAFARRNLKPTRGRNSQVGHNLRPPDWSKIDLPTCHKDLYREDFRTALRS
TVEVEAYREANEIIVTGRSVPKPILHVDEAGFPDFVKKVVEARNAGSSPAALQAQCWPIA
LSGRDLVAVVDSPASEGKSLAYLVPAIVHLQHQPAVLHGGGPVVLVLTATREVAQNVRAT
VEELSERSGIRTAYVVSGFPKEPQRRQLEDGAEICIATPGRLVAFMEDCKVNLHRCTYLV
LDEVDRMVAMGFRKQLCAIANNTRPDRQTLVWLSSRTLESHRLVEELAKDYVTVSVGTVT
PEYKNRQIEHIVYFCEKADKEDELIALLKDILKEESDNAIVFVETKKTVEELTWSMRLQG
WLAVGIHSSKTEREREWALNALRFGKARVLVATDMIATALHLDNVRFVVSYDCPSNPGEY
SRRFEHAARLDGTGRKYTFLEPGDSARARELMWFLQDAKQAIPAQLRKVAKQVTRK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaacggtataccagcgttgggtgggttcgcggtaccaccagtggcaatgccg
aatgaaggagttccagcagcgaatataaatttcggcccacccctgttcggcttcggacaa
ggcttcttcaacttcgggctaggccccttaggcatgggacgcggtaacttgcaacaaccg
cagggcgtcggagacaacctaacgacgctgttcgcgttcgccagaagaaacttgaaaccg
acccgtggccggaacagccaggtgggacacaacttacgcccgccggattggagtaagatt
gacttgccgacatgccacaaggatctctacagggaagacttcaggacggcccttagatcg
acggtagaagtggaggcctaccgggaagccaacgagatcattgtcacgggacgcagtgtg
cccaagccgatcctccacgtcgacgaagctggcttccctgactttgtgaagaaagtcgtc
gaggctcgcaacgctggctcgtcaccggccgcgttgcaagctcagtgctggcccatagca
cttagcggccgagatctcgtggccgtcgtcgatagccctgcatcggaagggaagtcgctg
gcctacctcgtcccggctattgtccaccttcagcaccagccagccgtgctgcatgggggt
ggacccgtagtgctggtgctgacagcgacgcgcgaagtggcccagaacgttcgcgccact
gtcgaggagcttagcgagaggtcgggaattcgaacagcgtatgtcgtgtctggctttccg
aaggaacctcagcggaggcagctggaggatggcgccgagatctgcatcgcaacgccaggc
cgcctggtagccttcatggaagactgcaaggtgaacttgcaccgctgcacgtacctggtg
ctggacgaagtggaccgcatggtggcgatgggcttccgcaagcagctttgcgccatcgcg
aacaacacccgaccggaccgccagacgctcgtgtggctctcatcccgcacgttagagtcg
catcgactcgtagaggagttggcgaaggactacgtcaccgtcagcgtcgggacggtgacc
ccggagtacaagaaccggcaaatagagcacatcgtctatttttgcgaaaaggctgataag
gaggacgagctcatcgccctcttgaaggacatcctcaaggaagagagtgacaacgccatc
gtatttgtcgaaacgaagaaaacggtggaagaactgacttggagcatgcgcctccagggc
tggctcgccgtcggcatccacagcagcaagacggagagagaacgggagtgggccctgaat
gccctgcggttcggcaaggcgcgcgtcttggtggccacagacatgatagcgacggctctc
cacctggacaacgtgcgcttcgtcgtcagctacgactgcccgagcaacccgggcgaatat
tcgcgccgcttcgagcacgcggcccggcttgacggtacgggtaggaagtacacgttcttg
gaacccggagacagtgcgcgtgccagggagctgatgtggtttctccaagatgccaagcag
gcaatacctgcgcagctacgtaaggtggcgaagcaggtgacacgaaagtag
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