Dermacentor silvarum: 119432689
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Entry
119432689 CDS
T07348
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
dsv
Dermacentor silvarum
Pathway
dsv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119432689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119432689
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
119432689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
DUF3874
Motif
Other DBs
NCBI-GeneID:
119432689
NCBI-ProteinID:
XP_049514313
LinkDB
All DBs
Position
11:complement(76408080..76449846)
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AA seq
853 aa
AA seq
DB search
MRFNAAHKQDISKWTQIRMERENNMKEFKLEDDMPKFGAGSEFGRDQKEEARRKKYGIIM
KKYNPDDQPWLLRVGGKGGKKFKAIREGGVSENTSFYVFCKAPDGVFEAFPIEEWYNFNP
VNRFKALTAEEAEVEFERRDKVMNHFSIMVRKKMSLEDEGSKEEAEEEKGKKGKKGKKEN
NRDFQLTEMDDWLSDSDGDGDDDSDGERDDDDAGGKKKKKGKAGEDDKKKKKKKKNESDE
EAMEESDEGDFDDREVDYMSESSSEEEEPEDEKANRELKGVEDEDALRAVDQSDEEEEGE
KEEEKPEGEEEAAKDEKTAEAKPKSKADKKEGGSSKSASKGNSSGESSSESSDSDFDDSK
FQSAMFMQSSSRQKPKKKNGCESANSSRANTPTKHVSDEKKGKDFWFKAIREGGVSENXS
FYVFCKXPDGVFEAFPIEEWYNFNPVNRFKALTAEEAEVEFERRDKVMNHFSIMVRKKMS
LEDEGSKEEAEEEKGKKGKKGKKENNRDFQLTEMDDWLSDSDGDGDDDSDGERDDDDAGG
KKKKKGKAGEDDKKKKKKKKNESDEEAMEESDEGDFDDREVDYMSESSSEEEEPEDEKAN
RELKGVEDEDALRAVDQSDEEEEGEKEEEKPEGEEEAAKDEKTAEAKPKSKADKKEGGSS
KSASKGNSSGESSSESSDSDFDDSKFQSAMFMQSSSRQKPKKKNGCESANSSRANTPTKH
VSDEKKGKGHGSVVQEPWDSDNKALKRKIREESPAAAKTDGSAPKRPRNESNLQSTPSMP
SSWSSSTEGITEESVRRYLLRKPMTTTELLQKFKSKKTGMSSEKLVNTIAQILKRLNPEK
QTIKGKLYLSIKP
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgcgattcaatgctgcgcacaaacaagacatatccaagtggacgcagattcgcatggag
agggagaataacatgaaggaattcaagcttgaggacgacatgccaaaattcggggcaggc
agcgagtttggtcgggaccagaaggaagaggcacgccgcaagaagtatggtatcatcatg
aagaagtacaaccccgatgaccagccttggcttctcagggttggcggcaagggagggaaa
aagttcaaggccatacgcgagggaggcgtttcggaaaatacgtctttctacgtcttctgt
aaggccccggacggtgtctttgaagcttttcccattgaggagtggtacaacttcaacccc
gtgaaccgctttaaggcactcaccgctgaagaagcagaagtggaatttgagaggagagac
aaagtgatgaaccacttctccatcatggttcgcaagaagatgtccctcgaggacgaagga
agcaaagaggaggcagaggaagaaaaaggaaagaaggggaagaagggcaagaaggagaac
aaccgagactttcaactcaccgaaatggacgactggttgagcgactcggacggcgatggt
gacgacgactcggatggcgagagggacgatgacgatgctggtggcaagaagaagaagaag
ggtaaagcgggagaggacgataagaagaagaagaagaaaaaaaagaacgagtccgatgag
gaggccatggaggagagcgacgagggagactttgacgacagggaagtggattacatgtca
gaatccagctctgaagaagaagagcccgaagacgagaaggcgaaccgcgagctgaaaggt
gtcgaggatgaggacgcccttagggccgtggaccagtccgacgaagaggaggaaggcgag
aaagaggaggagaagcctgagggagaggaggaggccgccaaggatgagaaaactgctgag
gccaagccgaagtcgaaggctgacaagaaagagggtggctcgtctaagagtgcatcaaag
ggcaactcctctggcgaatccagctccgagtcttcagactctgacttcgacgactccaag
ttccagtccgccatgttcatgcagtcttcttctcgtcagaaaccaaagaagaagaatggc
tgtgagagtgcgaacagcagccgtgcaaacacaccgaccaagcacgtgagtgacgagaag
aagggcaaagatttttggttcaaggccatacgcgagggaggcgtttcggaaaatncgtct
ttctacgtcttctgtaagngccccgacggtgtctttgaagcttttcccattgaggagtgg
tacaacttcaaccccgtgaaccgctttaaggcactcactgctgaagaagcagaagtggaa
tttgagaggagagacaaagtgatgaaccacttctccatcatggttcgcaagaagatgtcc
ctcgaggacgaaggaagcaaagaggaggcagaggaagaaaaaggaaagaaggggaagaag
ggcaagaaggagaacaaccgagactttcaactcaccgaaatggacgactggttgagcgac
tcggacggcgacggtgacgacgactcggatggcgagagggacgatgacgatgctggtggc
aagaagaagaagaagggtaaagcgggagaggacgataagaagaagaagaagaaaaaaaag
aacgagtccgatgaggaggccatggaggagagcgacgagggagactttgacgacagggaa
gtggattacatgtcagaatccagctctgaagaagaagagcccgaagacgagaaggcgaac
cgcgagctgaaaggtgtcgaggatgaggacgcccttagggccgtggaccagtccgacgaa
gaggaggaaggcgagaaagaggaggagaagcctgagggagaggaggaggccgccaaggat
gagaaaactgctgaggccaagccgaagtcgaaggctgacaagaaagagggtggctcgtct
aagagtgcatcaaagggcaactcctctggcgaatccagctccgagtcttcagactctgac
ttcgacgactccaagttccagtccgccatgttcatgcagtcttcttctcgtcagaaacca
aagaagaagaatggctgtgagagtgcgaacagcagccgtgcaaacacaccgaccaagcac
gtgagtgacgagaagaagggcaaagggcatgggagtgtggtccaagaaccatgggacagt
gataacaaagctctcaagcgcaaaatcagggaagaatctccagctgctgcaaaaacagat
gggtcagcaccaaaacgaccgcgtaatgaatcaaaccttcagtccacaccttccatgcct
agcagttggtcatcaagcacggaaggcatcactgaggagtctgtgaggcgctacctactt
cggaagcccatgaccaccacagagctcctccagaagttcaagtcaaaaaagactggcatg
agcagtgaaaagcttgtgaataccattgctcagattctgaaaagactgaaccctgaaaag
cagaccatcaaaggaaaactgtacctgtctataaaaccttga
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