Dermacentor silvarum: 119433784
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Entry
119433784 CDS
T07348
Name
(RefSeq) nucleoporin NDC1-like
KO
K14315
nucleoporin NDC1
Organism
dsv
Dermacentor silvarum
Pathway
dsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119433784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119433784
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119433784
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
DUF6825
Motif
Other DBs
NCBI-GeneID:
119433784
NCBI-ProteinID:
XP_037556962
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Position
11:110390969..110442665
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AA seq
571 aa
AA seq
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MSSGVKDWFRNEVHFWRCVHTIETVLAVQFILTPLALVFLQFNVFCPFDGFIDWLTSFTN
SPWYHICLLGAVFILAMYHVTCVNVVPVVHVTRLAQVVHFGHPRSQGHAMLRALAGAVFV
RALLGISSSPYAHLDVLCTPSSEGEYCMSEGYVFLVLHGAFTSVSLHLTQLAAKGFCLAF
PPIQVASVRMHLHIRSTVLRAAWETIRHAYIYYLLYFFLGSFPRSWIYGDVEPTIWIGDL
QTVYGLLDLRLFWALVVTGTALRTLDQLAVQMRDCFLTKGHLFPVMVQCDADKPMQLSTA
MTSRGCAFVQYLSFQDFRHLAEHSRARRAQVFAVSTPGFHPLHWGALCEACLVPVRQFSQ
ALGQVDVPPSTRTSQPPPKTSQVSKTPENLSFIRMRPLMATTPPPNPWQMMSPAQRPPPP
AQPKLSLANRMLAALKSKPLATYFISELPDVKSRQLFTDCQPLIWAIEGLCLLACASKTE
DQYGVVQFSLPSIFNALLELDQLLERHGKRCSILRRPNSSSGHELRLGRALAAAVSTGLY
QMATTFRQHLGAMDLTAESRRRLKQFTEFNR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtggcgtgaaggactggtttagaaatgaggtccacttctggaggtgcgtgcac
accatcgagacagttctggccgtacagttcattctcacccctctcgctttggtcttcctc
cagttcaacgtgttttgcccgttcgacggcttcatcgattggctgacatcattcacaaac
tcgccatggtaccacatttgcttgcttggcgcggttttcattctagccatgtatcacgtc
acctgcgtgaacgtggttcctgtggtacatgtgacacgcctggcacaagtggtgcacttt
ggtcacccgcgtagccaaggtcatgccatgttgcgagcacttgctggggctgtctttgtc
cgtgcactactgggcatctcgagcagcccgtatgcccacctggacgtgctgtgtacccca
tcgtccgagggcgaatactgcatgagtgaggggtacgtgtttctggtgctgcatggagca
ttcacttctgtcagcctgcacttgacccagttggctgccaaggggttctgccttgccttc
cctccaatacaggtggcgtctgtgcgaatgcacttgcacatcaggtccactgtactcaga
gctgcctgggagaccatcaggcatgcttacatctattacctgctgtatttctttctaggt
tcctttccaagaagttggatttatggagacgtggagccgaccatatggattggcgatctg
cagacagtatatggtctgttggacttgcggcttttctgggcactggtagtcactggcacc
gctctcagaactttggaccagctggctgtacagatgcgggactgctttctcaccaagggc
cacctttttcctgtcatggttcaatgtgatgcagacaagcccatgcagctgtcgacggcc
atgacatcacgtggctgtgcttttgtgcagtacctgagcttccaggacttccggcacctt
gctgagcattctcgagcacgccgagcacaagtatttgccgtcagcacaccaggcttccac
ccactgcactggggtgcactttgtgaagcgtgcttggttcctgtgcgccaattcagccag
gccctggggcaagtggatgtcccaccatcgacacgaacaagtcagcccccacctaagact
tctcaggtttccaaaacacctgagaatctttccttcatacgaatgcggccactgatggcg
acgacaccaccaccaaacccttggcagatgatgagccctgctcagcggccaccaccccct
gcccagccaaaattgtcactggctaatcggatgctggctgcactgaaaagcaagcctctg
gcgacctactttatctcggagctgcccgatgtcaagagcaggcagctgtttactgattgc
cagcctctcatctgggccattgaaggtctttgcttgctggcgtgtgcgtccaagactgaa
gaccagtatggtgtggtgcagttcagcctacccagcatcttcaatgccctactggagctt
gatcagcttctggaacgccatggcaagcgttgctccatcctgcgacgtcccaacagcagc
tcaggccatgagctgcgtttggggagggccttggcagctgcagtctcaacaggtctctac
caaatggcaaccacttttcgacagcaccttggtgcaatggatctcacagcagaaagcagg
cgacgcctgaagcagttcacagaattcaacagatga
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