Dermacentor silvarum: 119435256
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Entry
119435256 CDS
T07348
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119435256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsv03041
]
119435256
03009 Ribosome biogenesis [BR:
dsv03009
]
119435256
Enzymes [BR:
dsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119435256
Spliceosome [BR:
dsv03041
]
Complex A
U1 snRNP components
U1 related factors
119435256
Complex B
119435256
Ribosome biogenesis [BR:
dsv03009
]
Eukaryotic type
Pre-60S particles
Helicases
119435256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
DNA_circ_N
Motif
Other DBs
NCBI-GeneID:
119435256
NCBI-ProteinID:
XP_037558096
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MNGRGGRGRDFGSNWGGGDRRGGSGSYRNSQPGGNLRKPDWDRIQLQPFQKNFYQEHPNT
ANRSPAEVDAYRQANEITVKGREVHKPILHFEEGNFPDYIMKAIHAQNYTTPTCIQAQGW
PIALSGKDFVGIAQTGSGKTLGYILPAIVHINHQPYLQRGDGPIALVLAPTRELAQQIQQ
VSSDFGKFSRVRSTCVFGGAPKGPQLRDIERGVEICIATPGRLIDFLEAGKINLRRCTYL
VLDEADRMLDMGFEPQIRKIIEQIRPDCQTLMWSATWPKEVRSLAEDFLKDYIQINIGAL
QLCANHRILQIIDVCQETEKEDKLMKLHQEILNEKENKTIVFAETKRKVDDLTRKMRRYG
WPAICIHGDKTQQERDWVLNEFRSGRAPILVATDVAARGLDVDDVRFVINYDYPNCSEDY
IHRIGRTARSNKTGTAYTFFTPNNSRQAKELISVLQEANQVVNPKLYEIANNPRAGGGWG
GRGSRWRTGGGGGSSWRNSGGSSNTHTHFASGANSVSLGSRDNQMNGYGQQQNSYYSV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaacggacgcggcggcagaggtagggactttgggagcaactggggaggcggcgacagg
cgtggcggctcgggcagctaccgcaacagccagcccggcggcaacctgcgcaagccggac
tgggaccgcatccagctgcagcccttccagaagaacttctaccaggagcacccgaacacg
gccaaccggtcacccgcggaagtggacgcatatcggcaggccaacgagatcacagtcaag
ggtcgggaagtgcacaagcccatcctgcacttcgaggagggcaacttccccgactacatc
atgaaggccatccacgcccagaactacaccacgccgacctgcatccaagcccaggggtgg
cccatcgctctcagcggcaaggactttgtgggcatcgcccagacgggttcgggcaagacg
ctcggctacatccttcccgccattgtgcacatcaaccaccagccgtacctgcagcgagga
gacggccccattgctctggttcttgcgccaacacgtgagctcgcccagcagatacagcag
gtttcctccgacttcggaaagttctcgcgagtgcgcagcacttgcgtcttcggcggtgcg
ccgaagggaccccagcttagggatatcgaacgaggggttgagatctgcatcgccacgcct
ggccgccttattgacttcctagaggcaggcaagataaaccttcggcggtgcacatacctc
gttctggacgaggccgaccgcatgttggacatgggcttcgagcctcagatccgcaaaatc
atagagcagattcgtccagactgccagaccctcatgtggagcgccacctggcctaaggag
gtccgctccttggctgaggacttcctcaaggactacatccagatcaacatcggtgcgctg
cagctgtgtgccaaccaccgcatcctgcagatcatcgacgtctgccaggagactgagaaa
gaggacaagctcatgaaactgcaccaggaaattctcaatgaaaaggagaacaagaccatt
gtatttgcggaaacaaagcggaaagttgacgacctgaccaggaagatgcgccgctacggc
tggcctgccatctgcatccacggtgacaagacgcagcaggagcgtgactgggtgctcaat
gagttccggtctggaagggctcccatcctggttgcgactgatgtggctgcgcggggtctc
gatgtggatgacgtgcggtttgtgatcaactatgactaccctaactgctcggaggactac
atccaccggattggccggacggcgcgttccaacaagactggcaccgcctacaccttcttc
actcccaacaacagccggcaggcgaaggagctcatctcagtcctgcaggaggccaaccag
gtcgtgaaccccaagctctacgagatcgccaacaacccccgcgccggaggcggatggggc
ggccgtggaagccgctggcgcacggggggcggcggcggcagctcgtggaggaactctggt
ggctcaagcaacacacacacacactttgccagcggcgccaacagcgtatctctcggctct
cgagacaaccagatgaacggctacggccaacaacagaacagctactactctgtctag
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