Dermacentor silvarum: 119435870
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Entry
119435870 CDS
T07348
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
dsv
Dermacentor silvarum
Pathway
dsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119435870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsv03021
]
119435870
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119435870
Transcription machinery [BR:
dsv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119435870
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119435870
U7-dependent histone pre-mRNA processing factors
119435870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
HEAT_MROH2B_C
Motif
Other DBs
NCBI-GeneID:
119435870
NCBI-ProteinID:
XP_037558501
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MATKKKALEMRRSTAAQFFMDEEQVEQKSTSERVVELINLSALHQSIKDHHKVNNLRQVQ
ELIVYKEPDLLDNFLDEMLAFQNDRSSEIRKFVVGFIEEACKQDPDIFPKVLANLRMMFR
DEAVAVQKRVIQATTQLYKVALRWICQAKKVDDLMETSWEYIRSLKNDIVSLLDCDNDGI
RTHTIKFMEMLVILQTYPDGDSPKKAANDFALDDVPLMLKFIKPRKLEEEAKQVFDALVV
FHGTPHISSINLMTCMQALVLIAKHRSEFMSRVIQALESLHANLPPTLAKSQVSSVRKHL
KLQLLILMKHPAAVDYHGQISTLLTDLGATPQEISKSMPKPEEIKKRARLIEEGTAATPG
SATAPPSVKRIKLEAEEEEEEKEEEDTSTISKAATNTAIDITAEDLVPRLTTVNVTDIVL
VSMLSLPETMPAHFQASYTPIAVAGTETQIKHLARLISTQMTAAGLGKGVEEMIAKAKEQ
QQQDEEAMQTDEAAQPKQTIQTLLGGTTADAKKKEAKNAVLVPTGFEGKSRRLRQLNLAD
ITRPLSEDEMTQMLVSTVRRILDAGRESKSLNTSISPVQVKILAGLATQFGGEISASTCF
LYVYECTCNLMLSKHVHVFKLLKCSPALSLDII
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaagaaaaaggcgcttgaaatgcgccgcagcacggcggcgcagttcttcatg
gacgaagaacaagttgaacagaagtcaaccagcgaacgggttgttgaactcatcaacctt
tctgcattacatcaaagtattaaggaccatcataaagtcaacaaccttcgtcaggtccag
gagctcatcgtctacaaagagccggacctactcgacaactttctcgatgaaatgcttgca
ttccaaaatgatcgatcatcggagatccgaaagtttgttgttggattcatagaggaggca
tgcaaacaagatccagacatcttccccaaggtcttggccaatctgcgcatgatgtttcgg
gatgaagcagttgcagtgcagaagagggtaattcaggccaccacacaactgtacaaagta
gcattgcgatggatatgccaggccaagaaagttgatgaccttatggaaacgtcttgggaa
tacatcagaagcctcaagaacgacatagtgtctcttctggattgtgataacgacggtatc
cggactcataccatcaagtttatggaaatgctagtcatactgcaaacttacccggatggt
gacagtccaaagaaagcagcaaacgattttgctcttgacgatgttccattgatgctgaag
ttcatcaagcctcgaaagcttgaggaagaagcaaagcaagtttttgatgcacttgttgtg
tttcatgggacaccgcacatctcaagcatcaacttaatgacctgtatgcaagctcttgtg
ctcatcgcaaagcacaggtcagagttcatgtcaagagtcatccaggcgttagaatcactt
cacgcaaacctgccaccgacattagcgaagtcccaagtgagcagtgtacggaagcatctc
aagcttcagttactaatcctcatgaagcaccctgctgctgttgactatcatggccaaatt
agcacactgctaactgaccttggagcaacaccccaggagatctcaaagagcatgcccaaa
ccagaagaaatcaaaaagcgagcacggctcatcgaggagggcacagcagccacacctgga
agtgccacagcaccaccaagtgtcaagcgaataaaacttgaggccgaagaagaggaagaa
gaaaaggaagaggaagacacctcaacaatatcgaaggcagccaccaacacagccattgac
atcactgctgaagatttggtgccgcgactgacaaccgtgaacgtgactgacatcgtcctt
gtgagcatgctttcactgccagagacaatgcctgcacacttccaagcatcctacactccc
attgctgtagcgggcacagaaacccagatcaagcacttggcaagacttatctcgactcag
atgactgccgcgggcttgggcaagggagttgaggagatgatcgccaaagccaaggagcag
cagcagcaagatgaggaggccatgcagacagatgaagcagcgcagccgaagcagacaatt
cagacactcctaggtggaaccacagctgacgccaagaaaaaagaggccaagaatgcggtt
cttgtccccacaggctttgagggaaaaagccgaagactccggcaactcaacttggcagac
atcacgcgacctctttctgaagacgaaatgacccagatgctcgtctccacagttcggagg
attcttgatgctggccgcgaatcaaagtcactcaacaccagtatatcaccggtccaggtc
aagatccttgctggattggcaacccagtttggaggagaaatcagtgcaagtacgtgtttc
ctttatgtgtatgaatgcacgtgtaatcttatgctaagcaagcatgtgcacgtattcaaa
ctactaaaatgttctccagcattgtccttggatataatatga
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