Dermacentor silvarum: 119436624
Help
Entry
119436624 CDS
T07348
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like isoform X2
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
dsv
Dermacentor silvarum
Pathway
dsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119436624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsv03041
]
119436624
Spliceosome [BR:
dsv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119436624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
119436624
NCBI-ProteinID:
XP_037559472
LinkDB
All DBs
Position
1:198206743..198304535
Genome browser
AA seq
520 aa
AA seq
DB search
MSDDEDVAYVKRQKVVHYGSLEEKERQRLADREAEDGSDDDSQSTDLKAALASGNIHISE
EYMEIEDEGGRDKQQLLEEFERRKKARQINVSTDDTEVKSTLRDMGEPICLFGEGPADRR
ERLRHLLALVGQDAIRRKKEEERERERELRKDTYETTWYHESNEKLRECRLWIARFSLPR
ARHRIATAKEKLKAQGPAASDSQLHAKRQELYKTLRSLNINCSQIGDTRPISFCEFSPNS
QMLATSSWSGLCKLWSIPECNPIRTLRGHNCNVGAITFHPRSTYLQSENALNMASCSADG
VVNLWNLKSEEPISTLRGLCPHRVSRVAFHPSGRFLACCVFDHSWRLIDLETETEVLHQE
GHSKAVYDISFQCDGSLAATGGMDAFGRVWDLRTGRCIMFLDGHLKSVLSLCFSPNGYVL
ATGSEDNTIKLWDLRQRKCEYTIPAHHNLVSRVIFEKLSGEYLVTTSYDNTVKIWSNPEW
TPIHSLSGHDGKIMGADISPNGKYLATSSFDRTFKLWTPE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgatgaagatgtagcatatgtcaagcgccagaaagttgttcactatggaagc
cttgaagagaaagagcgtcagagactggcagatagagaagctgaagatggtagtgatgat
gattcgcaaagcacggacctcaaagcagccctggcctccggaaacattcatatatctgag
gagtacatggagattgaggatgaaggtggccgagacaaacagcagctgctggaggagttt
gagagaagaaaaaaggctcgtcagatcaacgtatcgactgatgacactgaggtcaagtca
actttgcgtgatatgggagaacctatttgcctgtttggtgagggccctgcagaccgtcgg
gaacgcttgcgtcaccttttggcacttgttggacaagatgcaatacggcgcaagaaggaa
gaagaacgtgagagagagcgagagctgcggaaggacacatacgaaacaacttggtatcat
gaaagtaatgagaagctgcgtgagtgccgtctgtggatagcacgtttctccttacctcgt
gcccggcaccgtatcgccacagctaaagagaaactgaaagcccaaggtcccgctgcatca
gattcacagctgcatgccaagcgacaggagctctacaagactctcagatctttgaatatc
aactgcagccaaattggggatacacgcccaatctccttttgtgaatttagtcccaactca
caaatgctagcaacgtcttcctggagtgggctgtgcaagctgtggtcgatcccagagtgc
aatcccatcaggaccttaagaggacacaactgcaatgtgggtgccatcacattccatcca
cggtcaacttacctgcagtctgagaatgcactcaacatggcctcttgctctgctgatggc
gttgtcaacttgtggaacttgaagagtgaagaaccaatcagcacattgagagggttgtgc
ccacacagggtctccagagtggcgttccacccttccggacgcttcttagcatgctgtgta
tttgatcattcttggcgtctaatagacttggaaactgaaacagaggtgctgcaccaagaa
gggcacagcaaagctgtttatgacatcagcttccaatgtgatggttcattggctgctact
ggtggcatggatgcatttgggcgtgtctgggacctccgtaccgggcgttgcatcatgttt
ctagatggtcatctgaaatctgtgctaagcctctgcttctcgcccaatggctatgttctg
gccactggaagtgaagacaacacaatcaagctgtgggacttgaggcaacgaaagtgcgaa
tacaccattcccgctcatcacaaccttgtgtcaagggtaatttttgaaaaattgtctggg
gaataccttgtcacaacatcgtacgacaacactgttaagatctggtccaatcctgaatgg
actccaatacacagcctcagcggtcatgatggcaaaattatgggtgctgacatttcacct
aatgggaaatacttggcgacatcatcctttgaccgcacatttaagctttggactccagaa
taa
DBGET
integrated database retrieval system
