Dermacentor silvarum: 119436684
Help
Entry
119436684 CDS
T07348
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
dsv
Dermacentor silvarum
Pathway
dsv04140
Autophagy - animal
dsv04142
Lysosome biogenesis
dsv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
119436684
04140 Autophagy - animal
119436684
04148 Efferocytosis
119436684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsv04131
]
119436684
Membrane trafficking [BR:
dsv04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
119436684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
Clathrin
VPS18_solenoid_2nd
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
119436684
NCBI-ProteinID:
XP_037559575
LinkDB
All DBs
Position
1:206505353..206511933
Genome browser
AA seq
895 aa
AA seq
DB search
MYEAYTVIPLIKKMPLKVESVAAHGDKLYLGTKDGNLLVYTVVEKDSADGPKFFVNLGFS
NKVFAKKPITQLCVIPELNLLISLSDGSLSVHHLSLEPNTPPIDCPALAKCKGCTLFAVN
VQEKTTLTGEVKITLMLCAAVKRKLELFYWKNNTFCEHPQGLCVPDTPRSIVWCGDESLL
VGFRSEYNILQLSGDTKQLFPTGKQPEPFCVKLKENSFALSRDDQTIFVNRDGLPTHKYA
VTWSEAPISLCYDYPYLLGAQSFGVEVRTVEPRALIQKVNFPKPRLLLPCKKGQLYILAD
SGAVWCILRTPVQDQIPQVLKDKCFELALKLADLSDQSEEERNASKRHIQNLHAFDLFCK
KKFEESLNIFMDLETDPSHVIGLFPDLLPEDYRNSISYPDKVPDLRDADLEAGLYALVDY
LVQVRCKLLSDTQHEPALTGIVQGSKTVKSKKQLLQIIDTTMLKCYLETNVALVASLLRL
PDNFYHLDECERALKKHQKLSELIILYQQKNQHEKALDLLMREAHKADSPLKGHERTVGY
LQHLGRKHMELILRYSLWVLEEHPEEGLKIFVEDQQEKEGEALPRDVVLDFLSKKAPSLV
IPYLQHVIHKWNDQTEMFHNTLIHKYIESVRSLLSQQHSPFVPGEPGPVAELRKDLVHFL
ETSDRYTAENFPTHLLSDGLFEEAAVVMGKLGRHSEALEVYIYVLSDPSKAEQYCASQYN
RNPERNRDVFLILLQMYLQPPDEGSRVLDLCRRTAANIAGLPSPLPIPKGCREQNLKGAL
KILIDHVKEIDPLRALQMLPGDVLVEDVRNFLREVLDRCTKELHAAGLQRSLLFAEHLQV
KERCVRVKSLKITLTELDVCCVCQKRIGSSAFARYPDGAVVHYSCREGYESRLAS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggcctacactgtgatcccattaatcaagaagatgccattgaaggttgagtcc
gtagctgcgcacggcgacaagttgtatttgggcacgaaggacggcaacctacttgtttac
accgttgttgagaaagatagcgccgacggtccgaagttctttgtcaatcttggcttttca
aacaaagtttttgccaagaagccgatcacccaactttgcgtcattcccgagctgaacttg
ctcatcagcttgtctgatggctccttgagtgtgcatcatctcagcctcgagcctaacacg
ccaccgattgactgcccagctttggccaagtgtaagggatgcacattatttgctgtcaac
gtacaggagaagactacgcttacgggcgaagtgaaaataactctcatgttgtgcgcggct
gttaagcgtaagcttgaactattctactggaaaaacaataccttctgcgagcacccgcaa
ggtttgtgcgtccctgacactccgcgatctattgtgtggtgtggcgacgaatctcttctc
gttgggtttagatccgaatacaatatcctacagttgtctggcgatacgaagcaacttttt
cctacgggaaagcagccggaaccgttctgcgtgaagctgaaagaaaatagcttcgctctc
agtagagacgaccagactattttcgtaaatcgcgatggcctgccaacgcacaaatacgca
gtcacctggtcagaggcaccgatctctctctgttatgactacccgtacctcttaggtgca
cagtcgttcggtgtagaggtgaggacagtggaaccgcgtgccctaattcagaaggtgaat
tttccgaagccgagacttctcctgccatgcaagaagggccagctgtacattttggcagac
agtggtgctgtgtggtgcattctgcggactcccgtgcaggaccaaattccgcaagttctc
aaggacaagtgctttgagctggccttgaagctagctgatctgtcagaccagagtgaggag
gaacgcaatgcaagcaaacgtcacatccagaacttgcatgctttcgaccttttctgcaag
aagaaattcgaagagtctctgaacatctttatggatctcgagacagatccgtcacatgtc
ataggccttttcccagatcttttgcccgaggactatcgtaattccatctcataccctgat
aaggtgcctgatctcagagatgctgatctagaggctgggctttatgcgcttgttgactac
ttggttcaagtcaggtgcaagctgctttcagacacccagcatgagcctgcacttaccggc
atagtgcaaggaagcaaaactgtaaaaagcaagaagcaacttctacagattattgacacc
acaatgctgaagtgctaccttgagaccaacgtggcactagtagcctcattgctacgtctc
ccagacaacttttatcatctggatgaatgtgaacgtgctctcaagaagcatcaaaaactt
agcgagttgatcatactgtaccagcaaaaaaaccaacatgaaaaggcacttgatttgctc
atgagagaggcacacaaggcagactccccacttaaaggccatgaaaggactgttggctac
ctccagcacctaggtagaaagcacatggagctcatactgcgttactcattatgggtgctt
gaagagcatccggaagaaggtctcaagatttttgttgaagaccagcaagagaaagaaggt
gaagctttaccccgagatgtagtgctcgacttcctgtccaaaaaggcaccttccctagtt
ataccttatcttcaacatgtcatccacaaatggaatgaccagactgaaatgttccacaac
acactcattcacaagtacatcgaatctgtgcggtcattgctctctcagcagcattcccca
tttgttcctggtgagccaggtccggtggcggaactgcgcaaagatttggttcattttttg
gagacctctgacaggtacacagctgagaacttccccacacacttgttgagtgatgggctt
tttgaagaggcagctgtagtaatgggcaagctaggacggcacagtgaagctcttgaggtc
tacatctatgtactaagcgacccatccaaggcagagcagtattgcgcatcacagtacaac
cgtaaccccgagcgcaatcgggatgtattcctgatcctgcttcaaatgtatttgcaacct
cctgatgaaggctctagggtcctggatctgtgtagacgtactgcagccaacattgcaggg
ctgccatcccccctgccaattcccaaaggttgccgtgaacaaaacttgaaaggtgcactg
aaaatcttaatagatcacgtgaaggaaattgacccattgcgtgccctccaaatgttgcct
ggggatgtgctagttgaagatgttcgaaattttctccgagaggtcttggatagatgcacg
aaagagttgcatgctgctggtctgcagagatcactgctatttgcagagcacttgcaggtg
aaagagcgttgtgtgcgtgtcaagtcactaaagataacactgacggagcttgatgtgtgt
tgtgtatgtcagaagagaatagggagcagtgcctttgccaggtatccagatggtgcagta
gttcattactcttgcagggaaggctatgagtcgaggttggcatcttga
DBGET
integrated database retrieval system