KEGG   Dermacentor silvarum: 119436684
Entry
119436684         CDS       T07348                                 
Name
(RefSeq) vam6/Vps39-like protein
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
dsv  Dermacentor silvarum
Pathway
dsv04140  Autophagy - animal
dsv04142  Lysosome biogenesis
dsv04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:dsv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    119436684
   04140 Autophagy - animal
    119436684
   04148 Efferocytosis
    119436684
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dsv04131]
    119436684
Membrane trafficking [BR:dsv04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    119436684
SSDB
Motif
Pfam: CNH Vps39_1 zf-Vps39_C Clathrin VPS18_solenoid_2nd TPR_Vps41
Other DBs
NCBI-GeneID: 119436684
NCBI-ProteinID: XP_037559575
LinkDB
Position
1:206505353..206511933
AA seq 895 aa
MYEAYTVIPLIKKMPLKVESVAAHGDKLYLGTKDGNLLVYTVVEKDSADGPKFFVNLGFS
NKVFAKKPITQLCVIPELNLLISLSDGSLSVHHLSLEPNTPPIDCPALAKCKGCTLFAVN
VQEKTTLTGEVKITLMLCAAVKRKLELFYWKNNTFCEHPQGLCVPDTPRSIVWCGDESLL
VGFRSEYNILQLSGDTKQLFPTGKQPEPFCVKLKENSFALSRDDQTIFVNRDGLPTHKYA
VTWSEAPISLCYDYPYLLGAQSFGVEVRTVEPRALIQKVNFPKPRLLLPCKKGQLYILAD
SGAVWCILRTPVQDQIPQVLKDKCFELALKLADLSDQSEEERNASKRHIQNLHAFDLFCK
KKFEESLNIFMDLETDPSHVIGLFPDLLPEDYRNSISYPDKVPDLRDADLEAGLYALVDY
LVQVRCKLLSDTQHEPALTGIVQGSKTVKSKKQLLQIIDTTMLKCYLETNVALVASLLRL
PDNFYHLDECERALKKHQKLSELIILYQQKNQHEKALDLLMREAHKADSPLKGHERTVGY
LQHLGRKHMELILRYSLWVLEEHPEEGLKIFVEDQQEKEGEALPRDVVLDFLSKKAPSLV
IPYLQHVIHKWNDQTEMFHNTLIHKYIESVRSLLSQQHSPFVPGEPGPVAELRKDLVHFL
ETSDRYTAENFPTHLLSDGLFEEAAVVMGKLGRHSEALEVYIYVLSDPSKAEQYCASQYN
RNPERNRDVFLILLQMYLQPPDEGSRVLDLCRRTAANIAGLPSPLPIPKGCREQNLKGAL
KILIDHVKEIDPLRALQMLPGDVLVEDVRNFLREVLDRCTKELHAAGLQRSLLFAEHLQV
KERCVRVKSLKITLTELDVCCVCQKRIGSSAFARYPDGAVVHYSCREGYESRLAS
NT seq 2688 nt   +upstreamnt  +downstreamnt
atgtatgaggcctacactgtgatcccattaatcaagaagatgccattgaaggttgagtcc
gtagctgcgcacggcgacaagttgtatttgggcacgaaggacggcaacctacttgtttac
accgttgttgagaaagatagcgccgacggtccgaagttctttgtcaatcttggcttttca
aacaaagtttttgccaagaagccgatcacccaactttgcgtcattcccgagctgaacttg
ctcatcagcttgtctgatggctccttgagtgtgcatcatctcagcctcgagcctaacacg
ccaccgattgactgcccagctttggccaagtgtaagggatgcacattatttgctgtcaac
gtacaggagaagactacgcttacgggcgaagtgaaaataactctcatgttgtgcgcggct
gttaagcgtaagcttgaactattctactggaaaaacaataccttctgcgagcacccgcaa
ggtttgtgcgtccctgacactccgcgatctattgtgtggtgtggcgacgaatctcttctc
gttgggtttagatccgaatacaatatcctacagttgtctggcgatacgaagcaacttttt
cctacgggaaagcagccggaaccgttctgcgtgaagctgaaagaaaatagcttcgctctc
agtagagacgaccagactattttcgtaaatcgcgatggcctgccaacgcacaaatacgca
gtcacctggtcagaggcaccgatctctctctgttatgactacccgtacctcttaggtgca
cagtcgttcggtgtagaggtgaggacagtggaaccgcgtgccctaattcagaaggtgaat
tttccgaagccgagacttctcctgccatgcaagaagggccagctgtacattttggcagac
agtggtgctgtgtggtgcattctgcggactcccgtgcaggaccaaattccgcaagttctc
aaggacaagtgctttgagctggccttgaagctagctgatctgtcagaccagagtgaggag
gaacgcaatgcaagcaaacgtcacatccagaacttgcatgctttcgaccttttctgcaag
aagaaattcgaagagtctctgaacatctttatggatctcgagacagatccgtcacatgtc
ataggccttttcccagatcttttgcccgaggactatcgtaattccatctcataccctgat
aaggtgcctgatctcagagatgctgatctagaggctgggctttatgcgcttgttgactac
ttggttcaagtcaggtgcaagctgctttcagacacccagcatgagcctgcacttaccggc
atagtgcaaggaagcaaaactgtaaaaagcaagaagcaacttctacagattattgacacc
acaatgctgaagtgctaccttgagaccaacgtggcactagtagcctcattgctacgtctc
ccagacaacttttatcatctggatgaatgtgaacgtgctctcaagaagcatcaaaaactt
agcgagttgatcatactgtaccagcaaaaaaaccaacatgaaaaggcacttgatttgctc
atgagagaggcacacaaggcagactccccacttaaaggccatgaaaggactgttggctac
ctccagcacctaggtagaaagcacatggagctcatactgcgttactcattatgggtgctt
gaagagcatccggaagaaggtctcaagatttttgttgaagaccagcaagagaaagaaggt
gaagctttaccccgagatgtagtgctcgacttcctgtccaaaaaggcaccttccctagtt
ataccttatcttcaacatgtcatccacaaatggaatgaccagactgaaatgttccacaac
acactcattcacaagtacatcgaatctgtgcggtcattgctctctcagcagcattcccca
tttgttcctggtgagccaggtccggtggcggaactgcgcaaagatttggttcattttttg
gagacctctgacaggtacacagctgagaacttccccacacacttgttgagtgatgggctt
tttgaagaggcagctgtagtaatgggcaagctaggacggcacagtgaagctcttgaggtc
tacatctatgtactaagcgacccatccaaggcagagcagtattgcgcatcacagtacaac
cgtaaccccgagcgcaatcgggatgtattcctgatcctgcttcaaatgtatttgcaacct
cctgatgaaggctctagggtcctggatctgtgtagacgtactgcagccaacattgcaggg
ctgccatcccccctgccaattcccaaaggttgccgtgaacaaaacttgaaaggtgcactg
aaaatcttaatagatcacgtgaaggaaattgacccattgcgtgccctccaaatgttgcct
ggggatgtgctagttgaagatgttcgaaattttctccgagaggtcttggatagatgcacg
aaagagttgcatgctgctggtctgcagagatcactgctatttgcagagcacttgcaggtg
aaagagcgttgtgtgcgtgtcaagtcactaaagataacactgacggagcttgatgtgtgt
tgtgtatgtcagaagagaatagggagcagtgcctttgccaggtatccagatggtgcagta
gttcattactcttgcagggaaggctatgagtcgaggttggcatcttga

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