Dermacentor silvarum: 119436962
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Entry
119436962 CDS
T07348
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
dsv
Dermacentor silvarum
Pathway
dsv04382
Cornified envelope formation
dsv04512
ECM-receptor interaction
dsv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119436962
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119436962
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119436962
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsv04147
]
119436962
00536 Glycosaminoglycan binding proteins [BR:
dsv00536
]
119436962
Exosome [BR:
dsv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119436962
Glycosaminoglycan binding proteins [BR:
dsv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119436962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
119436962
NCBI-ProteinID:
XP_037559938
LinkDB
All DBs
Position
1:237984694..238071069
Genome browser
AA seq
1773 aa
AA seq
DB search
MPRPPGLDKGARPRLTAAASALGLILVLLLHLPYSADAAACKGCAIQPCLCKGEKGGVGH
PGLPGSPGTEGXPGDLGPLGPTGRRGERGLSGDTGAIGPKGIRGEPGAPGFPGRPGAPGK
PGFDGLLGEPGIPGCNGSKGALGPHGPAGGWGPPGPRGPRGDYGPKGLPGDGGINSLGIR
GDPGDDGRPGPQGALGFPGFHGEKGVRGDSGPAGRPGPPGSPGPKGVQGDDAQGDKGPKG
EPGHPGDVGPPGDSYFFVGPPTIQQIPGDRGPKGEKGDIGSKGERGTRGVDGEAGLPGSD
GLKGEKGDIGEEGPRGKRGKEGVDGPSGEKGQKGEPGFTGIDGGSGDTGEPGEKGRSGSF
GTQGPPGPPGPTIEIGSPIPGPRGPQGVPGDMGLPGRDGEKGATGAMGYRGTVGEPGVPG
EAGAPGPRGLAIKGEPGEDGYPGVPGPRGQQGAPGPQGPLGDKGQPGLTVVGAPGEDGRP
GRDGRPGIPGVRGDPGLPGDQGTPGRGVPRPGPDGPPGLRGPQGDPGLPGRPGRPGEDGR
PGPRGDDCGYCPPGIPGDRGAPGDDGRPGSDGSMGFPGTTGPPGVKGDRGYTGPRGIPGL
PGRDGEPGWDGQKGEKGFPGEFIFPPGPLPPGSIKGEKGEPGDYGPRGLSGREGNPGPQG
LPGGIGFKGDTGDYGDPGYRGSDGVEGFPGLAGRKGEAGDFYIGEKGDDGEEGEPGDTGL
TGPPGDRGDPGLPVNAPDNLKHMTGDKGMPGLPGQSGREGQKGEKGSPGYDGLPGRQGDK
GDHGTPGYSQQGPKGLKGYPGLAGDQGPSGRRGAPGITGERGYEGRPGPKGPRGPTGTGK
GTGPQGLPGVLGLKGEQGLPGYPGGPGPAGQPGYAGAKGQKGEQGYIGYSGPKGVKGDAG
DAGIGTQGAPGLPGYDGLKGERGIPGIPGTDGFPGLPGVKGEAGSPGAPGPRGRDGQPGL
RGQPGTPGLEGYPGLKGRKGEAGEFGPPGWDGLAGEPGYPGLKGGKGERGVNGQPGFPGL
PGRPGLPGERGDVGYPGLEGLKGDRAQRGIRGDDGFPGPDGLPGPKGPVGFPGLPGRKGE
RGEPGRALGAPDGLPGEPGPRGYDGFPGLPGLKGEAGNPGSPGPAGLDGEPGFQGVAGLD
GANGLPGLPGLPGPDGFPGLPGFPGLKGDSGFDGRPGSAGPPGPPGLPGPPGFDGNPGIK
GETGEPGYPGLSTFEISKGDKGEPGQPGIPGPRGPPGDDGFPGLKGAKGQIGDPGFDGAP
GAAGRPGPKGYPGNPGPPGTEGAPATDVYPGPKGDEGVPGPPGFPGIPGLKGEAGEPGFP
GPDGPPGYPGVAPIGFKGEQGDAGLSGLPGTPGQQGAPGQPGYPGIPGSKGSRGDSGLPG
PVVPGPPGIPGPRGQDGQRGYKGEKGAPGESGFPGFPGLKGERGDSGFPGPSGRPGINGT
KGAKGQRGSSAPSDFQQTPRGIKGDAGFPGANGLPGLPGDQGFPGVNGEPGDYGLPGFPG
LPGYSGPRGLPGDEGFQGLPGFPGQPGTPGRPGNRGPPGGPARSRGYFFTRHSQTSRVPE
CPRGTHPLWSGYSLLYILGDEKAHGQDLGSAGSCLRRFSTMPFLFCSLNNVCNFASRNDY
SYWLSTPEPMPMAMTPIVGRDIQKYISRCSVCESSTQVIAIHSQTLEVPECPEGWDGVWS
GYSFFMNTDSGAEGSGQPLVSPGSCLEEFRPNPFIECHGHGRCNYYTTAFSYWLATIERH
DMFRPPDPQTLKAGDLRTRVSRCKVCRRQVIVP
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggccccccggcctggacaaaggcgctcggccgcggctgaccgctgccgcatct
gcgctcggcctcatactcgtcctgctgctccacctgccgtacagcgccgacgctgcggcg
tgcaaaggatgcgccatccagccatgtctatgcaaaggtgaaaaaggaggcgtgggccac
cctgggcttcccggttcgccgggcaccgagggantcccaggagatctcggtcccctggga
ccaaccggtcgccggggtgaacgtggcttgtcaggagacaccggagccatcggacccaag
ggaatccggggtgaacccggagcaccaggattcccaggcaggccaggtgcaccgggaaaa
ccgggtttcgatgggttgcttggagagccgggaataccaggctgcaacggaagcaagggc
gccctcggtccccatggtcccgccggtggctggggcccgccaggaccgcgcggtccccgc
ggagactatggacccaagggattgcctggagacggcggaataaactctctaggaattcgt
ggagatccgggagacgacggaagaccaggccctcagggcgcacttggtttcccaggcttt
catggcgagaaaggcgttcgaggagacagtggaccagcgggaagaccgggtcctccaggt
tctccgggccctaaaggcgtacagggtgatgacgcacaaggcgacaaaggacctaaggga
gaaccaggtcatcctggagatgtaggtccgcctggtgactcgtacttctttgttgggccg
ccaaccattcaacaaatccccggtgaccgaggaccgaagggtgaaaagggcgacattgga
agcaaaggtgaacgtggaacacgcggagtggatggagaagctggcctgcctggcagcgac
ggcctcaagggagaaaaaggagacataggcgaagaaggcccaaggggcaaaaggggcaaa
gagggagtcgatggtccgtccggagaaaaggggcagaaaggagaaccaggatttacagga
atcgatggtggttccggtgacacgggagaaccgggagagaaaggaagatccggaagcttt
ggaacacagggaccaccgggcccaccaggaccgaccatagagattggatcgcccatacca
ggacccaggggtccccagggcgtgcctggtgatatgggtctacctggacgcgacggcgaa
aagggtgccaccggtgcgatgggatatcgtggtacggtaggcgaaccgggcgtaccagga
gaggcaggagcacctggacctcgaggacttgccatcaagggcgagcccggagaggacggc
tatccgggagtaccagggccgcggggtcagcaaggagccccagggcctcaaggaccgctg
ggagataaaggccagccgggtctcacagtagtaggggctcccggagaggatggccgtccc
ggaagagatggacgaccgggcatccccggtgtacgcggagaccccggactaccaggtgac
cagggtacacccggtcgcggcgtgccgcgacctggccctgatggacccccaggtctacgt
ggaccacagggcgacccaggtcttccaggccggccgggtaggccgggtgaagacggccgc
ccaggacccagaggtgacgactgtggctactgtccgccgggtatacctggtgaccgcggt
gcaccaggagacgacggccgcccaggttccgatggctcaatgggattccccggaactacg
ggtccccctggggtgaaaggagacagaggttatacgggccctcgcggcatccctggccta
ccgggtcgagacggagaacccggctgggacggacagaagggcgagaagggcttccctggc
gagttcatctttccgccgggcccgctaccgccgggctccattaaaggcgagaagggcgaa
cccggagactatgggcctagaggcctgtctggccgcgagggcaaccccggaccgcagggc
ctgcctggtggcataggcttcaagggagacacgggtgattacggagaccctggctaccgt
ggctccgacggcgtagaaggcttcccgggtctggctggtcgcaagggagaagcgggagac
ttctacatcggcgagaaaggagacgacggcgaggaaggggagcccggagatacgggcttg
accggaccgcccggagacaggggtgatcccggactccccgtaaacgctccggacaatctc
aaacacatgacaggagacaaaggtatgccaggcttgcctggccagtccggcagagaggga
caaaaaggagagaaaggatcgcccggctacgacggcttgcctgggcgacaaggagacaag
ggtgaccacggcacgccgggctactcccaacagggtcccaagggtctcaagggctacccg
ggactcgccggagaccaaggaccctctggccgcagaggtgccccgggaattaccggagag
cgcggctacgaaggacgtcccggcccgaagggcccgcggggaccgactggcacgggtaag
ggcacgggaccgcagggcctgccgggtgtgctgggactaaaaggcgagcagggccttcct
ggataccctggaggccccggtccggccgggcagccaggatacgccggagcgaaggggcag
aaaggtgaacagggctacatcggatacagcggaccaaagggagtgaagggagacgctggc
gacgccggaatcggtacgcagggggcccctggacttcctggctacgacggcctgaaggga
gagcggggtattcccggcattcctggcactgacggtttccccggcctgcctggagtcaag
ggcgaagcgggatcaccgggcgcaccaggaccacggggccgtgacggtcaacccggcctc
cgaggtcagccaggaacaccaggtctcgaaggatacccgggattgaaaggtcgaaaaggc
gaggccggagagtttggtccacctgggtgggacggacttgccggagagccaggataccct
gggctcaaaggaggcaaaggagagcggggcgtaaatggacagcccggatttccgggtctt
cctggtaggccgggtcttccgggtgaacgtggagatgtcggatacccaggccttgagggt
ctgaagggagacagggcccaacgaggcattcgtggcgacgacggtttcccaggacccgat
ggtctgcctggtccaaagggtccggtcggattcccgggtcttcctggaagaaagggagag
cgcggagagccaggccgagcactgggcgcgccagacgggctaccgggagagccgggacct
agaggctacgacggattccccgggctgcctggactcaaaggcgaagccggaaacccggga
tcccccggccctgctggactggacggtgaaccaggattccagggtgtagcgggactcgac
ggcgcaaacggcctgcctggccttcccggtctccctggccctgacggatttccgggactt
ccaggattccccggcttaaagggcgattcgggctttgatggacgcccaggctccgctggt
ccgccgggtccaccaggcctccctggacctccgggatttgacggcaaccccggaatcaag
ggagagacaggagagcccggatatcccggtctttcgacgttcgagatcagcaagggagac
aagggagagccgggccagccgggaattcccggaccgcgcggccctcccggcgacgacggc
ttcccaggccttaagggcgcgaagggccagatcggtgaccccggtttcgacggcgcgccg
ggcgctgctggaaggcccggccccaaaggataccctggaaaccccggaccacctggaacg
gaaggagcacccgctaccgacgtctaccctggaccaaaaggagacgaaggcgttcccgga
ccgccaggcttccccggcattccgggactcaaaggtgaagcaggagaaccaggatttcca
ggacccgatggaccgcccggctaccccggtgtcgccccaattggcttcaaaggagaacaa
ggagatgcaggactaagcggccttccaggcacccctggtcaacagggagctccgggacag
cctggataccccggcatcccaggatcaaagggcagtcgaggagattcaggcttgccggga
cctgtcgttcctggaccaccgggaataccaggacccaggggacaagacggtcaacgaggc
tacaagggtgaaaagggggcacctggagaatcgggattccccggtttccctggactcaaa
ggcgaaagaggtgactccggcttccccggaccttctggaaggcccggaataaacggaaca
aaaggtgctaaaggacaacgtggcagctccgctccgagcgattttcagcagacgcctcga
ggtatcaaaggagacgcaggcttcccaggagccaacggattgccaggccttcccggcgac
caaggcttcccgggagtcaacggcgaaccgggagactatgggcttccgggattcccggga
cttccaggctactccggcccccgaggtctccccggcgacgaaggattccaagggctgcca
gggttccccggtcagccaggcacaccgggacgtccaggaaatcgtggtcctccgggtggt
cccgccaggtcccgaggctacttcttcaccaggcacagtcaaacttcacgagttccggaa
tgccccaggggcacccatccgctctggtctggctattctctcctttacatactcggcgat
gagaaagcccacggccaagacttgggaagtgccggaagctgcttgcggagattcagcacg
atgccattcctgttctgcagcctgaataatgtttgcaactttgcatcaaggaacgactac
agctactggctcagcactccggaaccaatgcctatggcaatgacaccaatcgtgggaaga
gacatccagaaatacatcagccgatgcagtgtctgcgagtcttccacccaagtcatagcc
atacacagccagactctggaagtaccagagtgccctgaaggctgggacggcgtttggtct
ggctacagcttcttcatgaacactgactcgggagcagagggcagtggccagcccttggtc
tcaccaggttcctgtcttgaagagttccgacctaatccatttattgaatgccatggtcat
ggccggtgcaactactacactacagccttcagctactggttggcaacaattgaacgccat
gatatgttcagaccaccagacccacagacgctcaaggcgggtgatctgagaacacgagtt
tctcgctgcaaagtttgcaggcggcaggttattgtcccttga
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