Dermacentor silvarum: 119437400
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Entry
119437400 CDS
T07348
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119437400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsv03041
]
119437400
Enzymes [BR:
dsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119437400
Spliceosome [BR:
dsv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119437400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
SRP54
PWI
nSTAND3
AAA_30
Flavi_DEAD
nSTAND_NTPase5
TsaE
Motif
Other DBs
NCBI-GeneID:
119437400
NCBI-ProteinID:
XP_037560357
LinkDB
All DBs
Position
1
Genome browser
AA seq
1033 aa
AA seq
DB search
MAGVEQWVSDQLHSILGLSDRYVAQFLVNMAQKSSSRQDLVAKIRDTGTISVNDDVVGFV
GQLWDKVPHKEQREKPARAHERAIREVLEQNAKYALLPDSDDEAPSTASAKKKTSKKRHL
RRKADEGSDEERPTASSSGEGVKVKQEPNWDSDPEDERLRDLKERDEFAARLRDRDKDKT
RNIVERSDKKAFEEAAKRLKLEAEDRQRLLPRLRIESRRQYLEKRKEDKLVELEADIHDE
NFLFSDVKLTDRERKELEYKQKVLQLAKEHDKARELEKVQRYRMPQESKGKDDIEEYVEV
DEREQVPQAEQRKWEEERMGIARMSFGARDAKEKHKEEKYDLILDDAIEFVQALRVPGTK
HKDSKPEPELSEHERKKLSIQETRRSLPVFPFREDLLQAVADHQVLIIEGETGSGKTTQI
PQYLYEAGYTADKMKIACTQPRRVAAMSVAARVSEEMGVKLGNEVGYSIRFEDCTSERTV
LKYMTDGMLLREFLSEPDLASYSVVIVDEAHERTLHTDILFGLVKDIARFRPDLKLLISS
ATLDAEKFSEFFDDAPIFKIPGRRFPVDIYYTKAPEADYLDACVVTVLQIHITQPLGDVL
VFLTGQEEIEACQEMLMERTRKLGSKIRELVILPIYANLPTELQAKIFEPTPMGARKVVL
ATNIAETSLTIDGIIYVIDPGFCKQNSYNARTGMDSLVVTPISKASARQRSGRAGRVAAG
KCFRLYTAWAYEHELEDNTVPEIQRVNLGNVVLMLKSLGINDLLHFDFLDPPAHETLVLA
LEQLYALGALNHLGELTKLGRRMAEFPVDPMMAKMLIASEKYRCSEEVLTIAAMLSVNSS
VFYRPKDKAIHADTARKNFFSPAGDHLTLMNVYNQWVDTDYSTQWCYENFLQQRSMKRAR
DIRDQLQGLMERVEIELLSNRDDSVTIRKAITAGYFYHTARFSKGGHYKTVKHQQTVMMH
PNSSLFEDLPRWVVYFELVFTTKEFMRQVIEIENSWLLEVAPHYYKAKDLDDSSTKKMPK
NTGKARADLVRVH
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgtcgagcagtgggtcagcgatcagctgcactccattttggggttgagcgat
cgctatgttgctcaatttctagttaacatggcccagaagagttcatctcgacaggacctc
gttgcgaagatacgtgacaccggcactatttctgttaacgacgatgtcgtcggattcgtg
gggcagctgtgggacaaggtaccgcacaaggagcagcgcgagaagccagcacgtgcccat
gaacgagctatacgagaagtgcttgagcagaatgctaagtacgcgctgcttcccgacagt
gatgatgaagcaccatcaacagctagtgctaagaagaaaacatcaaagaaaaggcatctc
cgccggaaagcagatgaaggaagtgacgaggagaggccaaccgccagcagtagtggtgag
ggggtgaaagtgaagcaggaacctaactgggactctgatccagaagatgaacggttgcga
gatctcaaagagcgagacgagtttgcagcccgtttacgtgaccgagacaaagataagaca
cgcaacattgtcgagcgctccgacaaaaaggcgtttgaggaggcggcgaaacgactgaaa
ctggaggctgaggaccggcagcggcttctgcctcggctgcggattgagtctagacgtcag
tatctggagaagcggaaagaagacaaactggttgagttggaagctgacatccacgatgag
aatttcctcttctcagatgtaaaactgaccgaccgcgagcgcaaggagctggagtacaag
cagaaggttctgcagctggccaaggagcatgataaggctcgggagctggagaaagtgcag
cgataccgcatgccccaggaatccaagggcaaggacgacattgaggagtacgttgaagtg
gacgagcgtgagcaggtgccacaggcagagcagcgcaagtgggaggaggagcggatgggc
attgcccgcatgagctttggtgcaagggacgccaaggagaagcacaaggaagagaaatat
gacctcatcttggatgatgccattgagttcgtccaagctctccgtgtaccaggtacaaag
cacaaggacagcaaacccgagccagagctgagtgagcatgaacgcaaaaagctgagcatc
caggaaacacgtcgcagccttcccgtctttccctttcgggaagatctcctccaagctgtt
gctgatcaccaggtgctgattattgaaggtgaaactggctcaggcaagacgacgcagatc
ccccagtacctttacgaggctggctacacagctgacaagatgaagattgcctgcacccag
ccacgacgagtagctgccatgagtgtggctgctcgagtctctgaggagatgggtgtcaaa
ctgggaaatgaggtgggctatagcatccgattcgaggactgcacatcagagcggacagtg
ctgaagtacatgacggatggcatgcttctcagggaatttctctctgagccagatttggct
agctatagtgtggtcatagtggacgaggcacacgagcgcacgcttcacacagatatcctg
tttggcctggtcaaggacattgcaagatttaggcccgacctcaagctactgatctcctca
gcaaccctggatgctgaaaagttctccgagttcttcgatgatgcacctatattcaagatt
ccagggaggaggtttccggtggacatctactacactaaggctcccgaggcagactacctg
gacgcatgcgtggtgacagtgctgcagatccacatcacccaaccgctgggtgacgtcttg
gtcttcctcacagggcaagaggaaattgaagcctgccaggagatgctcatggagaggacc
cgcaagctaggctccaagattcgggagctggtgatcctgcccatctatgccaacctgccc
acagagctgcaggccaagatctttgaaccgacacccatgggggctagaaaggtggtgctg
gcaactaacattgcagagacctctctgacaatcgatggcatcatctacgtgattgaccca
ggcttctgcaagcagaacagctacaatgcacgcacaggcatggactcactggttgtcacg
cccatctccaaggcatccgcccggcagcgttctggccgtgcaggtcgtgtggctgcaggc
aagtgcttccgcctctacactgcgtgggcatatgagcatgagctcgaggataacacagtg
cccgagatccagcgggtgaacctcggaaatgtagtgctaatgctcaagtcattaggcatc
aacgatctactccatttcgacttcctcgacccacctgctcacgagacattggtgcttgcc
ctggagcaactgtatgcgctgggtgctctgaaccatttgggtgagctcacaaaactgggc
cggcggatggctgaatttcccgttgaccctatgatggccaaaatgctcatcgcatctgag
aagtatcgctgctcagaggaggtgctcaccatcgctgccatgctgtcagtgaacagctct
gtcttctaccggcccaaggacaaggccatacatgctgacacggcacgcaagaacttcttc
tccccggctggggaccacctgacgctcatgaatgtctacaaccagtgggtcgacactgac
tattcgacccagtggtgctacgagaacttcttacagcagcggtccatgaagcgggctcgt
gacattcgtgaccagcttcaagggctcatggagcgggttgagattgaactgctgtctaac
agggacgatagtgtcaccattcgcaaggccatcacagccggatacttctaccacacagcc
cgcttttccaagggaggccactacaagacagtgaagcaccagcagacagtcatgatgcac
ccaaacagctcgctttttgaagacctgcctcgctgggtggtctactttgagttggtcttc
actaccaaggagttcatgcgccaggtcatcgagattgagaactcttggctgctggaggta
gcaccacattactacaaggccaaagaccttgacgacagctcaaccaagaagatgcccaag
aacacagggaaggcgagagccgatcttgtgcgagtccactga
DBGET
integrated database retrieval system
