KEGG   Dermacentor silvarum: 119437437
Entry
119437437         CDS       T07348                                 
Name
(RefSeq) roquin-1-like isoform X1
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
dsv  Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:dsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dsv03000]
    119437437
   04121 Ubiquitin system [BR:dsv04121]
    119437437
Transcription factors [BR:dsv03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    119437437
Ubiquitin system [BR:dsv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119437437
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-CCCH_UNK zf-CCCH_4 zf_CCCH_4 PaaA_PaaC Vesi_VP2
Other DBs
NCBI-GeneID: 119437437
NCBI-ProteinID: XP_049516493
LinkDB
Position
1:complement(360083305..360166438)
AA seq 930 aa
MARDQSPAQKRSASPGERAHRGTSWRPRHQRYAARRGHLGGHVQQTQLGDAVGAVGRRGF
PTGGAAASMPVQAPPPHSWGSAPATAASNACCCCRGRAPQPEGGCHAPQCRAHHLQQQQQ
QQQQPQPQQRRHLPENGVPPLLHLVSAPPPPPVAAAGATVIPAAAPAVATAVPEESAEQV
VARCIHEMALLLRPAAQGGCWLSRPLQRKLVSLVHCPLSEPEGRARAARAARSLGERCAL
ELLLQHHQHNQAGGGAGGGGQQLSAALWAAVRARGCQFLGPHMQEEVLRLVLLALEDGSP
LSRKVLVLFVVQRLAPHFPQASKTSIGHVVQLLYRASCFKVSKREGDSSLMQLKEEFCTY
EALRREHDAQIVQIASEAGLRIAPEQWSSLLYGDAAHRSHMQSLVDKLQSPQSFAQSVHE
LALALQRTGDPAGLAALRPHFDLLAHWEPPPGRRSWSWHQRSPRRNLGGSRAGLRGLHHD
GGAPTWEELSRCVLAARACLQGLVAFMGAFGGRRMNGGGGGAPSSSSPGRGRAETGGGAG
GGSPGHNPGGSRYKTSLCRDVAQRGSCPRGAHCTFAHSQEEMDRKPPYVRQNRYRKVFTA
KKHSAPVQNSQPPERKPPSQSDDRFRKYRARRPPRTSVDMPKPSGSNDGMTPSTSGYCCS
LYRSHEVDSSSDHRLASCPPVPVSLCESPPPMLAPPPCRRVDPVAPPVSVGLNPESPAFH
PDEPWLNPSPPCRVMLHHSLALSQLEDDDDWGSSHGSCDSSTSSHHPTRPCPSEEDPLVP
FDPPLVSKYGPISRCARTLVRGPAPIQVTSRQPQELTSPTAALRLPLASAAAAPSFYAQG
FALLPSDLPCGALGDPPPPLLFPFKSTPPFAPSTGALLAAPPALVAPPTKGSESWAGQPQ
VPTSMGPWLLNQLEESAQFCSDNCWTHQGH
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggcacgggaccaaagccctgcccaaaagcggagcgcctcgcccggcgagcgggctcat
cgcggcacctcgtggcggccacgccatcaacgctacgcagcacgccgcggccatcttgga
ggccacgtgcagcagactcagctaggcgacgctgtcggcgccgtgggccggcgaggtttc
cccactgggggggcagcagccagcatgcccgtgcaggctccgccccctcactcgtggggc
agtgcacctgccactgcagcctccaatgcctgctgttgctgccggggacgtgcgccacag
cctgaagggggatgccacgctccccagtgtcgcgcccaccacctccaacagcagcagcag
caacagcagcagccacagccacagcagaggcgtcacttacccgagaatggtgttcccccg
ctgctccaccttgtctctgcaccccctcctccacccgtggcggcagctggagctacggtg
attccagcagctgcgcctgctgttgcgaccgcagttccggaggagagtgccgagcaagtg
gttgcacgctgtattcacgagatggcgcttcttctcaggcctgctgctcaaggtggatgc
tggctgagccggcccttgcagcgcaagctggtttccctagtgcactgccccctgtcggag
ccagaggggcgggcccgggcggcccgcgcagcacgctcgctgggcgagcgctgtgccctc
gagctcctcctccaacaccaccagcacaaccaggcgggtggcggagcaggtggagggggc
cagcagctgagcgctgccctgtgggcggccgtacgtgcccgtggctgccagttcctgggg
ccccacatgcaggaggaggtgttgaggctggtcctccttgccctcgaggatgggtcgccc
ctgtcgcgcaaggtgttggtgctgtttgtggttcagcgcctggcaccccacttcccccag
gcctcaaagaccagcattggccatgtggtgcagctgctctacagggcatcctgcttcaag
gtgtccaagcgagagggtgactcatcgcttatgcagctcaaggaagagttctgcacatac
gaggcgctgcggagggagcatgacgcgcagatcgtccagattgccagcgaggcaggcctg
cggatcgcacccgagcagtggtcatcacttctctacggggatgcggcccatcggtcacac
atgcagtcgctggtggacaagctgcagagcccgcagtcctttgcgcagagcgtccacgag
ctggcgcttgcactgcagcggacgggtgatcctgcgggactggccgccctgcggccacac
tttgatctccttgcccattgggaaccaccgccaggtaggcgcagctggtcgtggcatcag
agatctccccggcgcaatctcggggggtcacgcgcaggcctgcgtgggttgcaccatgac
ggtggtgcaccgacgtgggaggagctgagccggtgcgtgctggcggcacgtgcctgtctc
caggggcttgtggcattcatgggggcctttggggggcggcgaatgaacggagggggcgga
ggagccccatcgtcctcttcgcccgggaggggcagggctgagacgggaggtggcgcgggt
ggtgggagccccggccacaaccctggtgggtcccgctacaagacgagcctgtgccgcgat
gtggctcagcgtggctcgtgcccccgcggggcccactgcacctttgctcactcccaggag
gagatggacagaaaaccaccttacgtccgacaaaaccggtacagaaaagtcttcaccgca
aaaaagcacagtgcacctgtgcagaattcgcagccgcctgaaagaaaaccgccttcccag
tctgatgacagattcagaaagtaccgtgcaaggcggcctccaaggacatctgtagatatg
cccaagccttctggcagtaatgacggcatgactcccagtactagtggctactgctgttca
ttgtaccggtcacatgaagtagacagcagctccgatcaccggctggcgtcctgcccaccg
gtgccggtcagtctgtgcgagtcgccaccgcctatgttggcgcctcctccttgtcgacgt
gtggatcctgtggctccaccggtctcggtcggcctcaatcccgaaagcccggcctttcac
ccggatgagccctggcttaacccctctccaccatgccgggtgatgctacatcacagcttg
gcactttcacaattagaggatgatgatgactggggctccagccatgggtcctgcgacagc
tctacctcgagccatcatccaactcgaccttgcccatctgaggaggatcccctggtgccc
tttgaccctcccttggtctccaagtatggacccatctcccgctgtgcgcgaacccttgta
agaggtcctgcccccatccaggtgacgtcccggcagccccaggaactgactagtcccaca
gctgccttgcggctgcccctggcatccgctgcggctgccccatcattctacgcacagggt
tttgcccttctcccaagtgacctgccatgcggggctctgggtgatcctccccctccgctg
ctgttccctttcaagagtacaccccctttcgccccctctacgggagccctgctggccgct
ccgccggcactcgtcgcacccccaactaagggaagcgagtcctgggcggggcagccccag
gtgccgacgtcaatgggtccctggctcctgaaccagctggaagagtcggcgcagttttgc
tccgacaactgctggacccaccagggacactga

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