Dermacentor silvarum: 119440619
Help
Entry
119440619 CDS
T07348
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03013
Nucleocytoplasmic transport
dsv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119440619
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119440619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119440619
03110 Chaperones and folding catalysts [BR:
dsv03110
]
119440619
04121 Ubiquitin system [BR:
dsv04121
]
119440619
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119440619
Chaperones and folding catalysts [BR:
dsv03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
119440619
Ubiquitin system [BR:
dsv04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
119440619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Zn_ribbon_RanBP
ARM_TT21_C
TPR_12
VID27_PH
IR1-M
TPR_1
ImpA_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
119440619
NCBI-ProteinID:
XP_037561442
LinkDB
All DBs
Position
2:complement(189225971..189351080)
Genome browser
AA seq
2720 aa
AA seq
DB search
MFRTKKDVDRHIAGILAKIKDEKEKKIRGFNFAKLYFSVNDYESARRHLADYLTVNDKQA
SAYKLMGEIHEAMGSFRQALQSYKHSLALQENQKDVVLKICEIYTELPADQESTKYWLER
AESLFPGHRIVFKLKESLTRARGEPDVKDMENLITSELVTRPLDVALRVKLLRLLLNSGR
VLDAYKHALQAEEEPQFGAEAVYSLPWQRCLADVFEAYLENQAGPVDESFLAKYLLTLDQ
LASLALTNPSSSAPATIPGPLNGESAKQGERAAVEDAISAIESLDGLLDKAHKKKWTRGG
AWDFVLHHVTGQLYLHMATLLLKRAWKESYSWQEARSWAAALLLSAHSLRPPSGLSQETW
FLALDSARQRLYRHVFLRAHHRLSVSGHIVHVLCEVESKSRWLSDLKQEACTPEVRKKIY
KSLFDGEGTASWFLHDPTLVKCAFEFPTLAALQEHDQEAQWLHPSSLNHLVWLALHWSSI
QDKKSKGTEHFFEVRVFERLQREPHAFNSGAAETLSQMDTLAFLEAARYCAAQSLGRKSM
RPSQGPLALPPHVGVQLCTGPQAEWWNAAYRLHTNTARDRMADFRRILQRGLEVIRGIGN
HSMDLALVVHLARTFAKKSLSRRADGLEEESKALEDWAAHYWEVVISMLEKSGSTSSPLS
ASRRLFCVSAGSALTGPQETRALKQEAKMFLAVRAMNADCLDEAAEMLSQLTTAQAAFYT
ALVMKKMAQREFPQRGVQHALLKNERAALQLALERGRREPDQALASAVRAQLDDLEGRLI
NVSNGSYTEEAAETSWAPDTSSTPRSAHVSFTRRPQQSSTPKVDPSFYPSRTDANQSSVS
EEESPTRQPRVQAAVPATAANEFVELQLRSLSLHQELVMSHLRQVQEVNQNVLRELRESH
QSVLAEVRQQQTALEQLSKKVDDIAAKAATAATASRAQRQREEPEYVDEYTTAYEGDYDP
YTDYSHLEAAAASGAASMVAAGPPHSVPPPPPPLGYPPPFRGATYAGYPPPPHLSYSLAP
PPPLGRPLPPPLAPPQPFYSPQVAAAAATVPTPGLCLAEGQPLPQFSFDISQPPPPTSIA
SSTPSHVASGDVGRLSAFSRLSKMPPPPASVPAPVVPPAAATTITAAAMTPKPPNAPHAF
QIPLPAAAAGPSPTLAAPAAPQGFPPSFLTSAAVAPTAPRFATAAPQLHGLLTGAVPALA
SVAPERQEPMTTIGARTAEASPVMTAQTPSPAAPRRLQRASTGSDDYVEEVEVEGNFTPL
IPLPEEVSVCTGEENEKVCFEERAKLFRYVDKEWKERGIGVVKLLESKEGKVRLLMRREQ
VLKVCANHYIQSGMTLAPMPKKDTAWIWDAQDFADGEPHPEKFCIRFKTPEIAAQFKEAF
EQAVNKSRQAAVSSSPAASASAASTATNFSMSPSALSSPRTTPAPSKFGPSTATTGMPAA
SFGSPVTVSASPASTPATFPVSTPGFGVSKSIVAPPVFGSATATTVVPAGPFSSPFVAST
PATTTGVTISSSTSSFGGPKTTAAAHVFGSAVGSTVTSAMSFASPIASSVVASGSPPTSL
PHLPATGFGKMFHPKPGAWACHTCYVSNDANKLACAACDSPKPGTEKPKTADAPVATQQP
TEKPDLAASISFGNSLGKPFNLQASQPAPVFSFGVSIPEQKPSTPVTSAFDGMASSGKNV
FGGFTFCGPPKVKELPKEEAKPATAVATTKESPKPSPFAGFSFKSPPAAVKKDEPPESAN
ATQSFLAGARSEISRLSTTPAKQPQVTSSLPAQPPVISSLPPQPQVSSPLAKPLPPTPSA
TRQRADSLRSPGEIPEDFVPSAEFEPVVSLPELVEVKTGEEDEEVLFCERAKLFRFDAET
KQWKERGIGQLKILRHPETQVCRVLMRRDQVLKLCANHRILPEMKLGPLSTNDRAWSWFA
NDYSDGEICNENLAARFKTREQADLFKQVFENCRDKAHPVTPLKEAAGEGKSDRTEEQQA
DKQLEPAPTVPLSQLSQFKPKAGAWNCDICYVSNPADRTSCVACETPKPGSEAVEAAPSP
LKALEKFAAPVSGGGGFPVGTAPAGVAPAKFTFGFPGASTVPQPTTTNLTSAPSTSQVAS
TTPKPSGFVFGSPRPGTVAPPSTFTFGAATFKPDTASSTSAPAATSTPTTFKFGSPQKYE
FSFSGVRPRSPGKTPKSPGTPADAEEDESGTIESPEAEIFFPPLVPLPPKVEVRTGEEEE
EVLYSHRAKLYRWMDGEWKERGLGDIKLLHHPTTQRTRLLMRREPVLKVCLNHLLTPEHQ
FCKKDDRTVTWSATDFSDDVACPYQFALRLKSSQVADEFLAAVEEAKSKSSGSVPPCTTQ
PLTKASTTPVDASTFSFRLDGDTGGSLSSSMTPPGGFSLGPRFGASKQTVVRSLFGNSST
AKDSEEDDDVQIVFEAKASPDKVARARELKLPDNFFLYETKTPCPGCRGCDDWESKKKAL
AASSRPAGLAKSASTKDAPHLAAADSTTGSLEDEGSGGGLFSTAPQLSFADLAKQQPGKG
FGFQGPSPKSGQSLFSGAGTKLFQSPTTRHGKSETEDDGADEVAPSVDIHFEPVVPLPEL
VELRTGEEDEEQLFCHRAKLFVFDSQNKQWKERAIGDIKILKHKTRPCCFRVLMRRDQVH
KIACNHSITEFTKLSPLSTSSNSLTWKALDFSEGQTSPEAFAVRFKNAEVMDKFAKVFEE
CRLAVVERGSQQGKNYCSYT
NT seq
8163 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcacgaaaaaggacgttgacaggcacatcgccggcattttggcgaaaattaaa
gatgaaaaggagaaaaagattagaggtttcaactttgccaagctttacttttcggttaac
gactatgagtctgccagaaggcacctggctgactacctgactgtgaatgacaaacaggcc
tctgcatacaagctcatgggggaaatccatgaagctatgggaagctttaggcaagccttg
cagtcctacaagcactccttggctcttcaggaaaaccagaaggatgttgtcctgaaaatt
tgtgaaatctacactgaattacctgctgaccaagagtcaactaagtactggctggagcga
gctgaaagcctttttccaggccacaggattgtttttaagctcaaggaaagtttgacaaga
gccagaggtgaaccagatgtgaaggacatggaaaatctcatcacatcggagttggtgacc
cgtccgctggatgtggcactgcgtgtgaagctgttgaggctactgctgaactctggacgt
gtgttggacgcctacaagcatgcactgcaagctgaggaagagccccagtttggcgccgag
gctgtctactcacttccctggcagcgctgcctagctgacgtatttgaggcctacctagaa
aaccaggctggccctgtggacgaatcgttccttgccaagtaccttctgacactggaccag
ctggcctctctggcactgaccaaccccagcagctctgcacctgctaccatacctggaccc
ctcaacggggagtcggccaagcagggggagcgtgctgctgtggaggatgccatcagtgcc
attgagtcgctggatggcttgctggataaggcccataagaagaaatggacacgtggtggg
gcctgggactttgtgctacatcatgtcaccggccagctgtacttgcacatggccacattg
ctcctcaagagggcctggaaggagagttacagctggcaagaagctcgcagctgggctgcg
gccctgttgctgagtgcccactcgttgcgtcctccaagtggcctgtcccaggagacttgg
tttctggcgctcgactccgccaggcagaggctttaccgtcacgtcttccttcgagctcac
caccggctctcggtttctggtcacatagtgcatgttctctgtgaagttgaaagcaagtct
cgttggctgtctgatctcaagcaagaagcatgcacacctgaggtacgaaaaaaaatttac
aagagcctatttgatggagaaggcactgcatcatggtttctccatgacccaactcttgtc
aagtgtgcctttgagtttcccacccttgcagcccttcaggagcatgatcaagaggcgcaa
tggctacacccttcatctcttaaccatctggtctggctggctctgcactggagttcaata
caagacaagaagtccaagggcactgagcacttctttgaggtgcgagtgtttgagaggctt
cagcgggagccacatgcgtttaattctggggcagctgagacgttgagccagatggatacg
ttggcattccttgaggcggcacggtactgtgcggctcagtcgctaggccggaaatccatg
cgtccctcgcagggacccttggcactccctccccacgtgggtgtgcagttatgcacaggg
ccacaggctgagtggtggaacgctgcttaccgcctacacaccaacactgccagggatcga
atggctgacttcaggcgcattctgcaaagaggacttgaagtgatccgtggaattggaaac
catagcatggaccttgctctggttgttcacttggctaggacatttgcaaaaaagtcgttg
tccaggcgagctgatggcctcgaggaggagtctaaggccctagaagactgggcggcacac
tattgggaggttgtcatttctatgctggaaaagtctggcagcaccagcagcccattgtcg
gcatcacgccggctgttttgtgtgtcagccggtagtgccttgaccggcccacaggagacg
agggccctcaagcaggaagccaagatgtttcttgctgtgcgtgctatgaatgcagactgt
ctggacgaggccgctgaaatgctctcccagttgaccactgcacaggctgccttttacact
gccctcgtgatgaagaagatggcccagcgcgagtttccccagcgaggtgtgcagcatgcc
ctgctgaagaatgaacgggccgctttgcagctcgccctcgagcgtggccgccgagagccc
gaccaggccttggcgtctgctgtacgcgctcagctggatgaccttgaggggcgcctcatt
aatgtctcgaatggctcctacactgaagaggcagcagaaacgtcttgggcaccagatacc
tcctccacaccccgttctgcccatgttagtttcactcgtcggcctcaacaaagcagcacc
cctaaggttgacccaagcttctacccatcacgtacagatgcaaaccagtcctcggtgtca
gaggaggagtccccaacaagacagccgagggtgcaggcggccgttcctgctactgctgca
aacgagtttgttgagttgcagctccgatccctgtcactgcaccaggagttggtgatgagt
cacctgcgccaggtgcaggaggtcaaccagaatgtgctgagggagctgcgcgaaagccac
cagtctgtcctggccgaagtcaggcagcagcagactgccttggagcagctctcgaaaaaa
gtcgatgacattgccgcaaaggcagccacggctgccactgcatctcgtgcacagcggcag
cgggaggagccagagtatgtggacgagtacacaactgcgtatgaaggcgactacgacccg
tacacggactattcacacttggaggcagcggctgccagtggagcagcttcgatggtggcg
gcagggccaccccactctgtgccaccaccaccaccgccactggggtacccaccaccattc
cgtggtgccacctatgcgggctatcctccaccaccccacctgagctattcgctagctccg
cccccacctctgggacgacccttgcctccacctttggcgcccccccagccgttttactcg
ccacaggtggctgcagcggccgccactgtaccaacccctggtctctgcttggctgaggga
cagcccctgcctcagttctcatttgacatcagccagccccctccgccaacttctattgcc
agcagcacgccctcccatgtggccagtggcgatgttggtcggctgtcagccttcagtcgt
ctgtccaagatgccaccgccgccagcttccgtgcctgctcctgtggtgccaccagcagcg
gccaccaccatcacggctgcggccatgacacccaagccgcccaatgccccgcacgctttc
cagatccccctgccggcagctgccgcaggcccttcgcccactttggcagcaccagctgct
ccccaggggtttccaccgtccttcctcacctcggctgcagtggctcccactgcccccagg
tttgccactgctgcacctcagctgcatggactactcacaggcgcagtgccggcacttgct
tctgtggctcctgaaaggcaggaaccgatgaccaccattggtgcaaggacggctgaagca
agcccagtcatgacggcgcagacaccgtctcctgcagcaccacgccgcctgcaacgagct
agcactggatcggacgactacgtggaggaagttgaagtcgaaggaaacttcacacctcta
attccactgcctgaggaggtgtcggtctgcactggcgaggagaatgaaaaggtttgcttt
gaagaaagagccaaactcttccgctatgttgacaaagagtggaaggaacgtggcattggt
gtcgtcaaattgcttgaaagcaaggagggcaaagtgcgcctactaatgcggcgagagcag
gtgctgaaagtatgtgccaaccattacattcagtctggaatgacactagcgccaatgcca
aaaaaggacactgcttggatttgggatgcccaagattttgcagatggtgagccacaccca
gaaaagttctgcatccgtttcaaaacgcctgaaatagcagcacagttcaaagaagctttt
gagcaagcagtcaacaagtccagacaggctgcagtgtcttcgtcaccagcagcctccgct
tcagcagccagcacagctaccaatttttcaatgtcaccgtcagctcttagctcccctaga
acaacaccggcaccttccaagtttggaccttcaacagctacgacagggatgcctgctgca
tcatttggttctccagtaactgtatctgcatctccagctagcacgcctgctacatttcca
gtatcgacgccaggcttcggtgtctccaagtcaatagtggcgcctcctgtgtttggatct
gcaacagctacaacagtagtacctgctgggccattcagttctccatttgttgcctccact
ccagcaactaccactggtgtgacaatttcctcatccacatcaagctttggtggccccaag
acaacagcggcggcacacgtgtttgggtcagctgtaggtagcacggtgacatcagctatg
tcatttgccagtcctatagcttcgtctgtcgtggcgtcgggatctccacccacaagcctc
cctcacctgccagcaactggtttcggcaagatgtttcatccaaaaccaggggcctgggcg
tgtcacacatgctatgtgagcaatgatgccaacaaactcgcatgtgcagcgtgcgactcg
ccaaagccgggcaccgagaaaccaaagactgcagacgcgcctgtagcaacacaacagcca
acagaaaaacctgatttggctgcttctatctcctttgggaattctttggggaagcctttt
aacctacaagcttcacagccagctcctgtgttctcattcggtgtctctataccagagcag
aagccaagcactcctgtcacttcagcttttgatggaatggcttcatcgggaaagaatgtg
tttggtggatttacattttgtggcccaccaaaagtaaaagagcttcccaaggaagaagca
aagcctgctactgcagtagcaacaacaaaggagtcgccaaagcccagcccttttgcaggc
ttttcattcaagagcccaccagccgcagtgaaaaaagatgagcccccagagtcggctaat
gcaactcagtcatttttagcaggtgcgcgttcagaaattagcaggctgagcacaacacca
gccaagcaaccacaggtgacatcttccctgccagctcaaccgccagtaatatcgtctctt
ccacctcaaccacaggtgtcatctcctctggcaaagccattacctccaactccgagtgca
actaggcagcgagcagactctctgcgaagccccggtgaaatacctgaggattttgtcccc
agcgccgagtttgaaccagtggtctccctaccggagcttgtggaggtcaaaacaggggaa
gaggacgaagaggtcctgttctgtgagagagccaaactgttccgatttgatgccgaaaca
aagcagtggaaggaacgtggaattggccaattgaagatccttcggcacccagagacacaa
gtatgccgtgtgttgatgcgcagggaccaagtgctcaagctgtgtgctaatcacaggatt
ttgccagagatgaaattgggcccgctgtcaacaaatgatcgcgcatggtcttggtttgcc
aatgattatagtgatggagaaatctgcaatgaaaaccttgcagcacgctttaagacgagg
gagcaagctgatctcttcaagcaagtatttgagaactgcagggacaaagcccaccctgtt
acacctctgaaagaagctgcaggggaagggaagagtgatagaaccgaggagcagcaggcc
gataagcaactggagccagcacctactgtgcctctctcccagttgagtcagttcaagcca
aaggctggcgcttggaactgtgacatctgctatgtgtcgaatccagctgacaggacatcg
tgtgtggcctgcgagaccccaaagcctggctcagaggctgttgaggctgcgccgtcgcct
ttgaaggcattggaaaagtttgctgccccagtgtctggaggtggtgggtttcctgttggc
actgcacctgcgggagttgcaccagccaagttcaccttcggatttccgggtgccagtacc
gttccgcagccaacaactaccaacttaacatcagcaccgtccacttcccaagtggcttca
acgacacctaaaccttcaggatttgtgtttggctccccacgcccaggcactgtcgcacca
ccatctactttcacattcggggcggcaacttttaagccggatacagcttcatctaccagt
gcaccagcggctacttctacgccaacaacgtttaaatttgggagccctcagaagtacgag
ttcagcttcagtggggtgcggccacgtagcccaggcaaaacgccgaagtcccctggtaca
ccagcagatgcggaggaagacgaatcgggcaccattgaatctcctgaggccgagatcttc
ttcccacctttggtacccttgcctcccaaggtggaggtacgcactggtgaggaggaagag
gaagttctgtacagccaccgggccaagttatatcgctggatggatggcgaatggaaggag
cgtggtcttggtgacatcaagctactccatcatccaaccactcaacgcactcggctgctg
atgcgccgggagccggtgctgaaagtgtgcctgaatcaccttctgacgcctgagcatcag
ttctgcaagaaagatgatcgcactgtcacgtggtctgcaacggatttttcggatgatgtg
gcgtgtccgtaccagtttgcgctgcgcctcaaaagctcacaggtagctgacgagttcttg
gctgccgtggaggaggcaaagagcaagtccagtggctctgtgccaccttgtacaacccaa
ccattgacaaaggcatcgacaaccccagtggatgcctccaccttctcatttcggctagat
ggtgacacaggagggagtcttagttcttctatgacacctcctggtggtttttcactagga
cctcgttttggcgcctctaaacaaacagtggtgcgctcgctgttcggcaactcttcgaca
gccaaggacagcgaagaggatgacgatgtacaaattgtattcgaggccaaggctagtccc
gacaaggttgcacgtgctagggaactgaagctgcctgacaacttcttcctttatgagaca
aagacgccgtgtcctggatgtcgaggctgtgatgactgggagagcaaaaaaaaagcactg
gcagcatcgtcaagacctgccggccttgcgaaatctgcatcaacaaaggatgcaccgcac
ctggctgcagctgacagcaccacaggcagcctggaagatgaaggcagtggtggtgggcta
tttagtacagctccacaactgtcttttgctgatctggctaaacaacagccaggcaaaggt
ttcggattccaaggtccatctcccaaaagtgggcagtcccttttctctggagcaggcacc
aagctgttccagtcacccacgacaaggcatggcaagtcagaaactgaggatgatggtgca
gatgaggtggcccccagcgtcgacatccacttcgagcctgtggtgcctttaccagaactg
gtggagctgcgcactggggaagaagatgaggagcagctgttttgtcacagggctaagttg
tttgtgtttgacagccagaacaagcagtggaaggagcgagccataggcgacatcaagatc
ctgaagcacaagacacggccctgctgtttccgtgtgctcatgaggagagaccaggtgcac
aaaattgcctgcaatcactccatcacagagttcacaaagctgtccccactgtcgacttca
tccaactcgcttacatggaaagcattggacttctctgaaggacagacttctccagaagcc
tttgccgtccgcttcaagaatgcagaagttatggacaagtttgccaaagtgtttgaagag
tgcaggctggctgttgtggaaaggggaagccaacaaggtaaaaactactgttcctatacc
taa
DBGET
integrated database retrieval system
